RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PARP8Q8N3A8 854 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 KCTD4Q8WVF5 259 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 CPB2Q96IY4 423 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 ZNF347Q96SE7 839 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 CPNE1Q99829 537 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 CTRCQ99895 268 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 RAVER2Q9HCJ3 691 aaKnown RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 FAM49BQ9NUQ9 324 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 SBF2Q86WG5 1849 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 ATP6AP2A0A1C7CYW4 349 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 ATP6AP2O75787 350 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 BBOX1O75936 387 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 TPPPO94811 219 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 TGFB2P61812 414 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 KRT76Q01546 638 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 SPCS2Q15005 226 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 POLD3Q15054 466 aaPredicted RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 PAGE2BQ5JRK9 111 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 WDR45BQ5MNZ6 344 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 SAMD4BQ5PRF9 694 aaKnown RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 LIPMQ5VYY2 423 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 RPS27LQ71UM5 84 aaKnown RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 DDIASQ8IXT1 998 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 DNAAF3Q8N9W5 541 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 PTCD2Q8WV60 388 aaKnown RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 SEPT8Q92599 483 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 NRBF2Q96F24 287 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 TWNKQ96RR1 684 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 RMDN3Q96TC7 470 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 GLIS2Q9BZE0 524 aaPredicted RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 LHPPQ9H008 270 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 ZNF385DQ9H6B1 395 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 TEX28O15482 410 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 MAN1A2O60476 641 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 GCATO75600 419 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 MAGP20916 626 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 IFITM3Q01628 133 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 PRKCEQ02156 737 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 MAPRE1Q15691 268 aaKnown RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 C6orf10Q5SRN2 563 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 STEAP4Q687X5 459 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 USP43Q70EL4 1123 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 OR52K1Q8NGK4 314 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 HTRA1Q92743 480 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 RBBP8Q99708 897 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 APOL2Q9BQE5 337 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 HMG20AQ9NP66 347 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 TNRC6CQ9HCJ0 1690 aaKnown RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 XYLBO75191 536 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 PSMB4P28070 264 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 ALDH4A1P30038 563 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 SFNP31947 248 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 CRTC3Q6UUV7 619 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 RFPL4BQ6ZWI9 263 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 CMTR2Q8IYT2 770 aaKnown RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 ZCCHC7Q8N3Z6 543 aaKnown RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 EPS8L2Q9H6S3 715 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 CYP4F12Q9HCS2 524 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMG8-202ENST00000543872 TMEM9Q9P0T7 183 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 KLHL3Q9UH77 587 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 SDHDO14521 159 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 AURKAO14965 403 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 TRIM24O15164 1050 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 UBDO15205 165 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 JRKO75564 520 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 ACTR2P61160 394 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 SEMA5AQ13591 1074 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 ZNF460Q14592 562 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 USP10Q14694 798 aaKnown RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 FAM35AQ86V20 835 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 SLC22A16Q86VW1 577 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 LSMEM2Q8N112 164 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 SYTL5Q8TDW5 730 aaPredicted RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 ZFP90Q8TF47 636 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 IARS2Q9NSE4 1012 aaKnown RBP12.79□□□□□ -0.36
SMG8-202ENST00000543872 VTI1BQ9UEU0 232 aa12.79□□□□□ -0.36
SMG8-202ENST00000543872 C2CD4BA6NLJ0 364 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 INPP4BO15327 924 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 PROZP22891 400 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 ADSLP30566 484 aaPredicted RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 CAPGP40121 348 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 TRAP1Q12931 704 aaKnown RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 EMC2Q15006 297 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 FAM183BPQ6ZVS7 135 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 OR13F1Q8NGS4 319 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 HTR3CQ8WXA8 447 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms