RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 AP3B1O00203 1094 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 NARSO43776 548 aaKnown RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 BNIP3LO60238 219 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 USP12O75317 370 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 PPFIA2O75334 1257 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 ZNF821O75541 412 aaPredicted RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 GSRP00390 522 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 AGTP01019 485 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 MLNP12872 115 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 GLULP15104 373 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 CA4P22748 312 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 GRIA1P42261 906 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 TNFRSF4P43489 277 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 RECQLP46063 649 aaPredicted RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 ZP2Q05996 745 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 DHX9Q08211 1270 aaKnown RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 SLMAPQ14BN4 828 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 E2F5Q15329 346 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 PTPRNQ16849 979 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 BBS9Q3SYG4 887 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 CARD16Q5EG05 197 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 DNAJC21Q5F1R6 531 aaKnown RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 FNBP1LQ5T0N5 605 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 LRRC8BQ6P9F7 803 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 NCEH1Q6PIU2 408 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 Q6ZVU0 165 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 KDELC2Q7Z4H8 507 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 CAND1Q86VP6 1230 aaKnown RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 SFTPA1Q8IWL2 248 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 DNAAF3Q8N9W5 541 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 KDM1BQ8NB78 822 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 CAVIN3Q969G5 261 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 IFT43Q96FT9 208 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 MRGPRX2Q96LB1 330 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 SERPINB12Q96P63 405 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 TBL1YQ9BQ87 522 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 APOL2Q9BQE5 337 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 FBRSL1Q9HCM7 1045 aaKnown RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 ARFGAP3Q9NP61 516 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 SLC2A4RGQ9NR83 387 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 EVLQ9UI08 416 aaPredicted RBP10.8□□□□□ -0.68
DDB1-221ENST00000543162 COL4A2P08572 1712 aa10.8□□□□□ -0.68
DDB1-221ENST00000543162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.79□□□□□ -0.68
DDB1-221ENST00000543162 EIF3HO15372 352 aaKnown RBP eCLIP10.79□□□□□ -0.68
DDB1-221ENST00000543162 AVILO75366 819 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 POP4O95707 220 aaKnown RBP10.79□□□□□ -0.68
DDB1-221ENST00000543162 ADRA1AP35348 466 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 SESN2P58004 480 aaPredicted RBP10.79□□□□□ -0.68
DDB1-221ENST00000543162 RAD51Q06609 339 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 CDK18Q07002 472 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 CDH17Q12864 832 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 PDIA2Q13087 525 aaKnown RBP10.79□□□□□ -0.68
DDB1-221ENST00000543162 MTM1Q13496 603 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 OLIG2Q13516 323 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 ZNF234Q14588 700 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 IHHQ14623 411 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 PON2Q15165 354 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 MYLK3Q32MK0 819 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 TXNDC11Q6PKC3 985 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 SERPINA13PQ6UXR4 307 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 RANBP10Q6VN20 620 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 ZNF534Q76KX8 674 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 TMC3Q7Z5M5 1100 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 PLPP6Q8IY26 295 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 OR52K1Q8NGK4 314 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 OR6K2Q8NGY2 324 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 FRS2Q8WU20 508 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 ANKRD7Q92527 254 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 MSANTD3Q96H12 275 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 MYO19Q96H55 970 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 FEM1CQ96JP0 617 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 ATP13A3Q9H7F0 1226 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 SAYSD1Q9NPB0 183 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 CASS4Q9NQ75 786 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 HECAQ9UBI9 543 aaPredicted RBP10.79□□□□□ -0.68
DDB1-221ENST00000543162 ARIH1Q9Y4X5 557 aaPredicted RBP10.79□□□□□ -0.68
DDB1-221ENST00000543162 PCDHGC4Q9Y5F7 938 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 RAI2Q9Y5P3 530 aa10.79□□□□□ -0.68
DDB1-221ENST00000543162 LOC285095A0A1B0GVY8 99 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 SDR42E2A6NKP2 422 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 E7ESA3 106 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 ALOX15BO15296 676 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 NDST3O95803 873 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 EPOP01588 193 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 DRD1P21728 446 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 SERPINA4P29622 427 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 MAGEA3P43357 314 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 MAGEA4P43358 317 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 CHRNA4P43681 627 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 NPY2RP49146 381 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 CCNHP51946 323 aaPredicted RBP10.78□□□□□ -0.68
DDB1-221ENST00000543162 PMS2P54278 862 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 BCL2L1Q07817 233 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 GRSF1Q12849 480 aaKnown RBP eCLIP10.78□□□□□ -0.68
DDB1-221ENST00000543162 MSS51Q4VC12 460 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 SLC44A4Q53GD3 710 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 TMEM196Q5HYL7 178 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 HP1BP3Q5SSJ5 553 aaPredicted RBP10.78□□□□□ -0.68
DDB1-221ENST00000543162 BEND6Q5SZJ8 279 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms