RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 RASSF1Q9NS23 344 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 ZDHHC7Q9NXF8 308 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 TBC1D14Q9P2M4 693 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 LCMT1Q9UIC8 334 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 PYCARDQ9ULZ3 195 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 DNAJC16Q9Y2G8 782 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 GPR52Q9Y2T5 361 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 RRP7AQ9Y3A4 280 aaKnown RBP4.31□□□□□ -1.72
MDM2-229ENST00000543046 CACNA1IQ9P0X4 2223 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 GCC2Q8IWJ2 1684 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 TOP2BQ02880 1626 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 PLXNC1O60486 1568 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 MBD5Q9P267 1494 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 GAGE12JA6NER3 117 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 SAC3D1A6NKF1 404 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 C17orf100A8MU93 164 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 KLKB1P03952 638 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 MX1P20591 662 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 PRKCHP24723 683 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 CHMLP26374 656 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 PRPHP41219 470 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 P2RX3P56373 397 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 ARHGAP8P85298 464 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 BYSLQ13895 437 aaKnown RBP4.3□□□□□ -1.72
MDM2-229ENST00000543046 BMP2KLQ5H9B9 411 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 FBXO47Q5MNV8 452 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 Q5PR19 223 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 CBWD5Q5RIA9 395 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 CCDC183Q5T5S1 534 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 PARM1Q6UWI2 310 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 LEKR1Q6ZMV7 388 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 CCDC186Q7Z3E2 898 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 FAM217AQ8IXS0 508 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 ANKRD44Q8N8A2 993 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 LRRC57Q8N9N7 239 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 SCAIQ8N9R8 606 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 KDM1BQ8NB78 822 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 FAR1Q8WVX9 515 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 SMARCE1Q969G3 411 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 COG8Q96MW5 612 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 THUMPD2Q9BTF0 503 aaKnown RBP4.3□□□□□ -1.72
MDM2-229ENST00000543046 SUDS3Q9H7L9 328 aaPredicted RBP4.3□□□□□ -1.72
MDM2-229ENST00000543046 VEZTQ9HBM0 779 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 NOD2Q9HC29 1040 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 SIRT3Q9NTG7 399 aaPredicted RBP4.3□□□□□ -1.72
MDM2-229ENST00000543046 ICKQ9UPZ9 632 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 OSGIN2Q9Y236 505 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 SLC4A4Q9Y6R1 1079 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 RPS6KL1Q9Y6S9 549 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 PLB1Q6P1J6 1458 aa4.3□□□□□ -1.72
MDM2-229ENST00000543046 FHOD3Q2V2M9 1422 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 BIVM-ERCC5R4GMW8 1640 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 REREQ9P2R6 1566 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 IPO8O15397 1037 aaKnown RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 STRNO43815 780 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 WDHD1O75717 1129 aaPredicted RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 TMCC1O94876 653 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 DDAH2O95865 285 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 HOXB2P14652 356 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 GCFC2P16383 781 aaKnown RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 CD53P19397 219 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 TNFSF8P32971 234 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 MTNR1AP48039 350 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 MRPL12P52815 198 aaKnown RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 TUBB4BP68371 445 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 GOLGA8FQ08AF8 430 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 PPFIA1Q13136 1202 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 PKP1Q13835 747 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 EFR3AQ14156 821 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 NEDD9Q14511 834 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 PDIA5Q14554 519 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 IL13RA2Q14627 380 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 AP5B1Q2VPB7 878 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 AP1ARQ63HQ0 302 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 DENND1BQ6P3S1 775 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 TMCO3Q6UWJ1 677 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 TADA2BQ86TJ2 420 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 CAMK1DQ8IU85 385 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 ANKRD18AQ8IVF6 992 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 TEX11Q8IYF3 940 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 C9orf106Q8NAJ2 232 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 NEK11Q8NG66 645 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 CCDC26Q8TAB7 109 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 MAGEC3Q8TD91 643 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 HDAC7Q8WUI4 952 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 NCSTNQ92542 709 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 MASTLQ96GX5 879 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 PYM1Q9BRP8 204 aaKnown RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 FUCA2Q9BTY2 467 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 B3GNT4Q9C0J1 378 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 CTDSP1Q9GZU7 261 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 ISCUQ9H1K1 167 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 EBF3Q9H4W6 596 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 LUZP4Q9P127 313 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 CLIP2Q9UDT6 1046 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 CDH22Q9UJ99 828 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 ZNF215Q9UL58 517 aaPredicted RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 DHDHQ9UQ10 334 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms