RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MYO18AQ92614 2054 aaKnown RBP23.39■■□□□ 1.33
HOMER3-205ENST00000542541 A0A1W2PQF6 199 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 TNFRSF10AO00220 468 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 DCNP07585 359 aaKnown RBP23.38■■□□□ 1.33
HOMER3-205ENST00000542541 ZSCAN5DPP0CG00 497 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 NIPAL4Q0D2K0 466 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 PTK6Q13882 451 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 TRIP13Q15645 432 aaPredicted RBP23.38■■□□□ 1.33
HOMER3-205ENST00000542541 SLC14A2Q15849 920 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 PKN3Q6P5Z2 889 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 JAMLQ86YT9 394 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 CHST14Q8NCH0 376 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 TMIEQ8NEW7 156 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 OR6K2Q8NGY2 324 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 OR2T3Q8NH03 318 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 OSBPL1AQ9BXW6 950 aa23.38■■□□□ 1.33
HOMER3-205ENST00000542541 MUC22E2RYF6 1773 aaPredicted RBP23.38■■□□□ 1.33
HOMER3-205ENST00000542541 TTI1O43156 1089 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 CA4P22748 312 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 PSMB4P28070 264 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 SERPINA4P29622 427 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 CD86P42081 329 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 BCL2L1Q07817 233 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 GAS6Q14393 721 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 FAM182AQ5T1J6 154 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 C8orf74Q6P047 294 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 PRUNE1Q86TP1 453 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 PBXIP1Q96AQ6 731 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 LRRC45Q96CN5 670 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 ZNF641Q96N77 438 aaPredicted RBP23.37■■□□□ 1.33
HOMER3-205ENST00000542541 FAM129BQ96TA1 746 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 RSPH9Q9H1X1 276 aaPredicted RBP23.37■■□□□ 1.33
HOMER3-205ENST00000542541 FAM153AQ9UHL3 310 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 TTC24A2A3L6 582 aaPredicted RBP23.37■■□□□ 1.33
HOMER3-205ENST00000542541 PSMD3O43242 534 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 METTL18O95568 372 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 GEMP55040 296 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 GPS1Q13098 491 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 MPP3Q13368 585 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 FAM46CQ5VWP2 391 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 CCDC70Q6NSX1 233 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 KIAA1211LQ6NV74 962 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 MAMSTRQ6ZN01 415 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 BMP8AQ7Z5Y6 402 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 PRPF39Q86UA1 669 aaKnown RBP23.37■■□□□ 1.33
HOMER3-205ENST00000542541 RBM15Q96T37 977 aaKnown RBP eCLIP23.37■■□□□ 1.33
HOMER3-205ENST00000542541 RAB6BQ9NRW1 208 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 ASIC3Q9UHC3 531 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 PPM1HQ9ULR3 514 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 WASF2Q9Y6W5 498 aa23.37■■□□□ 1.33
HOMER3-205ENST00000542541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.36■■□□□ 1.33
HOMER3-205ENST00000542541 C1QTNF3-AMACRE9PGA6 284 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 RAD51CO43502 376 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 ADCY8P40145 1251 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 VPS41P49754 854 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 SKOR1P84550 965 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 GLE1Q53GS7 698 aaKnown RBP23.36■■□□□ 1.33
HOMER3-205ENST00000542541 ARSIQ5FYB1 569 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 TMEM92Q6UXU6 159 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 GDPD4Q6W3E5 623 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 SPATA22Q8NHS9 363 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 GRIN3AQ8TCU5 1115 aa23.36■■□□□ 1.33
HOMER3-205ENST00000542541 ERI2A8K979 691 aaKnown RBP23.35■■□□□ 1.33
HOMER3-205ENST00000542541 E7EVH7 732 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 PI15O43692 258 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 SOCS5O75159 536 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 LEFTY1O75610 366 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 GJB3O75712 270 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 IL1BP01584 269 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 MMP2P08253 660 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 COL9A1P20849 921 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 TNNT3P45378 269 aaPredicted RBP23.35■■□□□ 1.33
HOMER3-205ENST00000542541 TUBB4BP68371 445 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 MTAPQ13126 283 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 ZNF776Q68DI1 518 aaPredicted RBP23.35■■□□□ 1.33
HOMER3-205ENST00000542541 TMPRSS6Q8IU80 811 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 MMAAQ8IVH4 418 aaKnown RBP23.35■■□□□ 1.33
HOMER3-205ENST00000542541 PAF1Q8N7H5 531 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 NOA1Q8NC60 698 aaKnown RBP23.35■■□□□ 1.33
HOMER3-205ENST00000542541 PIP4K2CQ8TBX8 421 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 TADA1Q96BN2 335 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 SUV39H2Q9H5I1 410 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 ETNK1Q9HBU6 452 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 CD248Q9HCU0 757 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 DLGAP2Q9P1A6 1054 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 UTP11Q9Y3A2 253 aaKnown RBP23.35■■□□□ 1.33
HOMER3-205ENST00000542541 ARIH1Q9Y4X5 557 aaPredicted RBP23.35■■□□□ 1.33
HOMER3-205ENST00000542541 PCDHGC4Q9Y5F7 938 aa23.35■■□□□ 1.33
HOMER3-205ENST00000542541 ATG2BQ96BY7 2078 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 A0A1W2PQ67 120 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 F5H423 210 aaPredicted RBP23.34■■□□□ 1.33
HOMER3-205ENST00000542541 ALDH1A2O94788 518 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 MT-CYBP00156 380 aaPredicted RBP23.34■■□□□ 1.33
HOMER3-205ENST00000542541 GKP32189 559 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 SATB1Q01826 763 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 CFAP58Q5T655 872 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 CAMK1DQ8IU85 385 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 TAB3Q8N5C8 712 aaPredicted RBP23.34■■□□□ 1.33
HOMER3-205ENST00000542541 HCAR2Q8TDS4 363 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 OXNAD1Q96HP4 312 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms