RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 E5RJQ4 531 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 STX16-NPEPL1H3BU86 382 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 STX16O14662 325 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 FIBPO43427 364 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 STX6O43752 255 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 SYT1P21579 422 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 ALDH1B1P30837 517 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 RPS13P62277 151 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 SSBP2P81877 361 aaPredicted RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 GHRHRQ02643 423 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 SRSF4Q08170 494 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 THOC5Q13769 683 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 STX1AQ16623 288 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 CCDC57Q2TAC2 916 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 SUPT20HL1Q3ZLR7 823 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 CCDC40Q4G0X9 1142 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 LRRC23Q53EV4 343 aaPredicted RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 EARS2Q5JPH6 523 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 COLEC12Q5KU26 742 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 LIPMQ5VYY2 423 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 CAPRIN2Q6IMN6 1127 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 DEF8Q6ZN54 512 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 ARHGAP22Q7Z5H3 698 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 LRRTM4Q86VH4 590 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 USP38Q8NB14 1042 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 TRIM58Q8NG06 486 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 B4GALNT2Q8NHY0 566 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 FAM76AQ8TAV0 307 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 CCDC47Q96A33 483 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 SPDL1Q96EA4 605 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 COG8Q96MW5 612 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 AGAP3Q96P47 875 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 SLX1AQ9BQ83 275 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 HERC2P3Q9BVR0 1158 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 QTRT1Q9BXR0 403 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 TRIM7Q9C029 511 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 CLPBQ9H078 707 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 VCPKMTQ9H867 229 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 GJD2Q9UKL4 321 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 CORO1CQ9ULV4 474 aaPredicted RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 PPRC1Q5VV67 1664 aaKnown RBP4.75□□□□□ -1.65
C2CD3-218ENST00000542484 ADGRL2O95490 1459 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 CDC42BPAQ5VT25 1732 aa4.75□□□□□ -1.65
C2CD3-218ENST00000542484 NOS1P29475 1434 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 FAM135BQ49AJ0 1406 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 PPIP5K1Q6PFW1 1433 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 GOLGA6L4A6NEF3 574 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 BECN2A8MW95 431 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 TP73O15350 636 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 NCAM2O15394 837 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 WDHD1O75717 1129 aaPredicted RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 PRR35P0CG20 571 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 CKMT1AP12532 417 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 HOXB9P17482 250 aaPredicted RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 KELP23276 732 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 PEX19P40855 299 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 AMPHP49418 695 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 ACTN3Q08043 901 aaPredicted RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 DYNC1I2Q13409 638 aaKnown RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 ALKBH1Q13686 389 aaKnown RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 SEMA3AQ14563 771 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 CASP8Q14790 479 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 ANKRD1Q15327 319 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 EZH2Q15910 746 aaKnown RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 TAF12Q16514 161 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 ALDH1L2Q3SY69 923 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 SLC9C1Q4G0N8 1177 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 GXYLT1Q4G148 440 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 KIAA1755Q5JYT7 1200 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 MAP3K21Q5TCX8 1036 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 TRIM65Q6PJ69 517 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 CPOQ8IVL8 374 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 FAM114A1Q8IWE2 563 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 SCN4BQ8IWT1 228 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 ARL14EPQ8N8R7 260 aaPredicted RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 WIPF2Q8TF74 440 aaPredicted RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 SNRNP27Q8WVK2 155 aaKnown RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 USP13Q92995 863 aaPredicted RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 BICD1Q96G01 975 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 CCDC114Q96M63 670 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 PRAM1Q96QH2 718 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 SIGLEC11Q96RL6 698 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 HDHD5Q9BXW7 423 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 MOV10Q9HCE1 1003 aaKnown RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 RIC8AQ9NPQ8 531 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 UTP6Q9NYH9 597 aaKnown RBP4.74□□□□□ -1.65
C2CD3-218ENST00000542484 RRN3Q9NYV6 651 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 DTX4Q9Y2E6 619 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 KIF24Q5T7B8 1368 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 FANCAO15360 1455 aa4.74□□□□□ -1.65
C2CD3-218ENST00000542484 CDHR2Q9BYE9 1310 aa4.73□□□□□ -1.65
C2CD3-218ENST00000542484 ADGRL3Q9HAR2 1447 aa4.73□□□□□ -1.65
C2CD3-218ENST00000542484 SRRM3A6NNA2 597 aaPredicted RBP4.73□□□□□ -1.65
C2CD3-218ENST00000542484 KCNJ18B7U540 433 aa4.73□□□□□ -1.65
C2CD3-218ENST00000542484 EIF3HO15372 352 aaKnown RBP eCLIP4.73□□□□□ -1.65
C2CD3-218ENST00000542484 LUC7L3O95232 432 aaKnown RBP4.73□□□□□ -1.65
C2CD3-218ENST00000542484 PYGLP06737 847 aa4.73□□□□□ -1.65
C2CD3-218ENST00000542484 CTSAP10619 480 aa4.73□□□□□ -1.65
C2CD3-218ENST00000542484 PKMP14618 531 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms