RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 TKTP29401 623 aaKnown RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 ABCD1P33897 745 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 MAPK10P53779 464 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 LILRA4P59901 499 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 PRAMEP78395 509 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 GSTM4Q03013 218 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 PTPN11Q06124 597 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 IKBKEQ14164 716 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 TFDP2Q14188 446 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 ZBTB6Q15916 424 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 OR6B2Q6IFH4 312 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 XKR5Q6UX68 686 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 CYP2R1Q6VVX0 501 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 NCCRP1Q6ZVX7 275 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 DCLK2Q8N568 766 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 MCUQ8NE86 351 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 KHSRPQ92945 711 aaKnown RBP eCLIP9.25□□□□□ -0.93
THBS3-211ENST00000541990 MCRS1Q96EZ8 462 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 TMEM176AQ96HP8 235 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 GATA5Q9BWX5 397 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 NAA50Q9GZZ1 169 aaKnown RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 SYBUQ9NX95 663 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 COX16Q9P0S2 106 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 SFMBT1Q9UHJ3 866 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 TSPAN16Q9UKR8 245 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 TTC3P53804 2025 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 BPTFQ12830 3046 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 BCLAF3A2AJT9 711 aaKnown RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 KPNA7A9QM74 516 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 TK2O00142 265 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 ADAM23O75077 832 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 GABBR2O75899 941 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 BCAS2O75934 225 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 HSPA1AP0DMV8 641 aaKnown RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 HSPA1BP0DMV9 641 aaKnown RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 ITGB8P26012 769 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 PRDX6P30041 224 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 ZNF143P52747 638 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 TGFBIQ15582 683 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 DCAF4L1Q3SXM0 396 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 TRIM60Q495X7 471 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 CCDC14Q49A88 953 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 FSCBQ5H9T9 825 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 NXNQ6DKJ4 435 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 HMBOX1Q6NT76 420 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 PMF1Q6P1K2 205 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 TRAF7Q6Q0C0 670 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 GK5Q6ZS86 529 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 BEST2Q8NFU1 509 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 PXYLP1Q8TE99 480 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 C12orf43Q96C57 262 aaKnown RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 ISOC1Q96CN7 298 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 FCRL3Q96P31 734 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 AGAP2Q99490 1192 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 OSBPL6Q9BZF3 934 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 PRDM5Q9NQX1 630 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 C20orf96Q9NUD7 363 aaPredicted RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 TMEM30AQ9NV96 361 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 ASNSD1Q9NWL6 643 aa9.25□□□□□ -0.93
THBS3-211ENST00000541990 PRPF19Q9UMS4 504 aaKnown RBP9.25□□□□□ -0.93
THBS3-211ENST00000541990 CITO14578 2027 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 RGSL1A5PLK6 1076 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 TRIM43BA6NCK2 446 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 USP12O75317 370 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 DDHD2O94830 711 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 CLIC3O95833 236 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 FUCA1P04066 466 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 CAPNS1P04632 268 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 UGT1A6P19224 532 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 ME2P23368 584 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 NDUFV1P49821 464 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 GOLGA7BQ2TAP0 167 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 DCAF6Q58WW2 860 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 SDHAF4Q5VUM1 108 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 C16orf89Q6UX73 402 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 TTC30AQ86WT1 665 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 RNF168Q8IYW5 571 aaPredicted RBP9.24□□□□□ -0.93
THBS3-211ENST00000541990 LRRC43Q8N309 656 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 FAM47BQ8NA70 645 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 SLAIN1Q8ND83 568 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 APBB2Q92870 758 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 SLCO4A1Q96BD0 722 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 LRRC39Q96DD0 335 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 LGMNQ99538 433 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 DCDC2Q9UHG0 476 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 REV3LO60673 3130 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 KANSL1LA0AUZ9 987 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 GOLGA8TH3BQL2 631 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 J3QRK9 145 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 GRID2O43424 1007 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 ALDH1A2O94788 518 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 LCP1P13796 627 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 CYP2F1P24903 491 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 GPD2P43304 727 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 TLE2Q04725 743 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 TIGD5Q53EQ6 642 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 STEAP4Q687X5 459 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 SLC2A14Q8TDB8 520 aa9.24□□□□□ -0.93
THBS3-211ENST00000541990 GPR152Q8TDT2 470 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms