RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PRKCQQ04759 706 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 GEN1Q17RS7 908 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 TTMPQ5BVD1 217 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 SFTPA1Q8IWL2 248 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 PALM2Q8IXS6 379 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 ZNF557Q8N988 423 aaPredicted RBP28.16■■■□□ 2.1
CCM2-218ENST00000541586 EDAQ92838 391 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 SHDQ96IW2 340 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 LRRC40Q9H9A6 602 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 PIH1D1Q9NWS0 290 aaKnown RBP28.16■■■□□ 2.1
CCM2-218ENST00000541586 AAR2Q9Y312 384 aaKnown RBP28.16■■■□□ 2.1
CCM2-218ENST00000541586 GOLGA6CA6NDK9 693 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 GOLGA8KD6RF30 607 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 USP12O75317 370 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 ANXA9O76027 345 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 KAT7O95251 611 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 MT-CYBP00156 380 aaPredicted RBP28.15■■■□□ 2.1
CCM2-218ENST00000541586 APODP05090 189 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 GOLGA6DP0CG33 693 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 PABPC1P11940 636 aaKnown RBP28.15■■■□□ 2.1
CCM2-218ENST00000541586 GLDCP23378 1020 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 SSTR1P30872 391 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 ETFBP38117 255 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 PREPLQ4J6C6 727 aaPredicted RBP28.15■■■□□ 2.1
CCM2-218ENST00000541586 MPP5Q8N3R9 675 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 GOLGA6AQ9NYA3 693 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 SHISA7A6NL88 538 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 PSMD3O43242 534 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 TSHRP16473 764 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 GRIA2P42262 883 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 GRSF1Q12849 480 aaKnown RBP eCLIP28.15■■■□□ 2.1
CCM2-218ENST00000541586 C3orf62Q6ZUJ4 267 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 APCDD1Q8J025 514 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 OR52K1Q8NGK4 314 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 EPS8L3Q8TE67 593 aaKnown RBP28.15■■■□□ 2.1
CCM2-218ENST00000541586 MSANTD3Q96H12 275 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 PPP1R2P1Q96PQ5 205 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 SLC25A51Q9H1U9 297 aa28.15■■■□□ 2.1
CCM2-218ENST00000541586 MAXP61244 160 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 SIGLEC14Q08ET2 396 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 PGBD5Q8N414 524 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 TERB1Q8NA31 727 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 FEM1AQ9BSK4 669 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 ROPN1BQ9BZX4 212 aaPredicted RBP28.14■■■□□ 2.1
CCM2-218ENST00000541586 CENPHQ9H3R5 247 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 ROPN1Q9HAT0 212 aaPredicted RBP28.14■■■□□ 2.1
CCM2-218ENST00000541586 SLC27A6Q9Y2P4 619 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 ACTL7AQ9Y615 435 aa28.14■■■□□ 2.1
CCM2-218ENST00000541586 COL4A2P08572 1712 aa28.14■■■□□ 2.09
CCM2-218ENST00000541586 MIA3Q5JRA6 1907 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 CBX4O00257 560 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 CPP00450 1065 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 GEMP55040 296 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 SESN2P58004 480 aaPredicted RBP28.13■■■□□ 2.09
CCM2-218ENST00000541586 ITKQ08881 620 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 STAT4Q14765 748 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 UBXN2BQ14CS0 331 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 LONRF1Q17RB8 773 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 TMEM196Q5HYL7 178 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 NUDT18Q6ZVK8 323 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 PHTF2Q8N3S3 785 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 LMLNQ96KR4 655 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 EBNA1BP2Q99848 306 aaKnown RBP28.13■■■□□ 2.09
CCM2-218ENST00000541586 CIPCQ9C0C6 399 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 CASS4Q9NQ75 786 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 UBA2Q9UBT2 640 aaPredicted RBP28.13■■■□□ 2.09
CCM2-218ENST00000541586 ZC3H7BQ9UGR2 993 aaKnown RBP28.13■■■□□ 2.09
CCM2-218ENST00000541586 VPS28Q9UK41 221 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 INTS6Q9UL03 887 aaKnown RBP28.13■■■□□ 2.09
CCM2-218ENST00000541586 OR51B4Q9Y5P0 310 aa28.13■■■□□ 2.09
CCM2-218ENST00000541586 TLDC2A0PJX2 215 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 SMIM23A6NLE4 172 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 PRRT4C9JH25 899 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 RASGRF2O14827 1237 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 EGFP01133 1207 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 ALADP13716 330 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 PHBP35232 272 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 SLCO1A2P46721 670 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 STARD6P59095 220 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 IMP4Q96G21 291 aaKnown RBP28.12■■■□□ 2.09
CCM2-218ENST00000541586 CCDC77Q9BR77 488 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 FOXQ1Q9C009 403 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 MAD1L1Q9Y6D9 718 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 KANSL1LA0AUZ9 987 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 SDR42E2A6NKP2 422 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 TCEA3O75764 348 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 MGAT1P26572 445 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 SEC13P55735 322 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 NIPAL4Q0D2K0 466 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 ZNF235Q14590 738 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 PLEKHG6Q3KR16 790 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 TMEM215Q68D42 235 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 NAPEPLDQ6IQ20 393 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 FSTL4Q6MZW2 842 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 CROCCP2Q86T23 111 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 PRPF39Q86UA1 669 aaKnown RBP28.12■■■□□ 2.09
CCM2-218ENST00000541586 AHI1Q8N157 1196 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 CFAP36Q96G28 342 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 APOL2Q9BQE5 337 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 MFSD1Q9H3U5 465 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms