RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ACVR2BQ13705 512 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 KLF9Q13886 244 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-217ENST00000541578 ETFDHQ16134 617 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 GLE1Q53GS7 698 aaKnown RBP4.48□□□□□ -1.69
SNHG1-217ENST00000541578 TMEM65Q6PI78 240 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 SLC39A5Q6ZMH5 540 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 GLCCI1Q86VQ1 547 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 MON1AQ86VX9 555 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 AKAP1Q92667 903 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNHG1-217ENST00000541578 ATP6V1E2Q96A05 226 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 TRMT61AQ96FX7 289 aaKnown RBP4.48□□□□□ -1.69
SNHG1-217ENST00000541578 CNDP2Q96KP4 475 aaKnown RBP4.48□□□□□ -1.69
SNHG1-217ENST00000541578 FAM118BQ9BPY3 351 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 ADGRE3Q9BY15 652 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 ARHGAP39Q9C0H5 1083 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 USP44Q9H0E7 712 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 MUC13Q9H3R2 512 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 EPHX3Q9H6B9 360 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 SFXN1Q9H9B4 322 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 BRF2Q9HAW0 419 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 PCDHB16Q9NRJ7 776 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 SLC25A10Q9UBX3 287 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-217ENST00000541578 CD207Q9UJ71 328 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 DHDHQ9UQ10 334 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 MSH6P52701 1360 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 PZPP20742 1482 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 NEURL4Q96JN8 1562 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 FGD6Q6ZV73 1430 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 CYP3A7-CYP3A51PA0A087WV96 503 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 DSCR3O14972 297 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 PER2O15055 1255 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 TP73O15350 636 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 BCAR3O75815 825 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 RNF8O76064 485 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 RPN1P04843 607 aaKnown RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 LYL1P12980 280 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 SFPQP23246 707 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 CYP3A7P24462 503 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 POU1F1P28069 291 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 GCH1P30793 250 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 GALNSP34059 522 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 HNF1BP35680 557 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 NNMTP40261 264 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 KRTAP10-11P60412 298 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 PRAMEP78395 509 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 RAE1P78406 368 aaKnown RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 EFNB1P98172 346 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 EPS8Q12929 822 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ZNF268Q14587 947 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 MED22Q15528 200 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 TRIP6Q15654 476 aaKnown RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 TMEM266Q2M3C6 531 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ALDH1L2Q3SY69 923 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ARMC3Q5W041 872 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 DCDC5Q6ZRR9 648 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 SZRD1Q7Z422 152 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ANKRD23Q86SG2 305 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 TEX11Q8IYF3 940 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 LINC01465Q8N7H1 131 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 C12orf76Q8N812 135 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 FRMD1Q8N878 549 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 CCDC191Q8NCU4 936 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 DNAAF1Q8NEP3 725 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 PRSS3P2Q8NHM4 247 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 MAFAQ8NHW3 353 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ZNF398Q8TD17 642 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 CREB3L4Q8TEY5 395 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 LRRC59Q96AG4 307 aaKnown RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 RADILQ96JH8 1075 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 SPATA17Q96L03 361 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 KLHL15Q96M94 604 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 NR1H4Q96RI1 486 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 PIP5K1AQ99755 562 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ABHD14AQ9BUJ0 271 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 EFHD1Q9BUP0 239 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 MXD3Q9BW11 206 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ERVK-5Q9HDB9 667 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 SEMA4BQ9NPR2 832 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 TLR8Q9NR97 1041 aaKnown RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 GAR1Q9NY12 217 aaKnown RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 TUBA8Q9NY65 449 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 KLHL13Q9P2N7 655 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 PEMTQ9UBM1 199 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 MAGED1Q9Y5V3 778 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-217ENST00000541578 ROBO1Q9Y6N7 1651 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 STRCP1A6NGW2 1772 aa4.47□□□□□ -1.69
SNHG1-217ENST00000541578 NCOA3Q9Y6Q9 1424 aa4.46□□□□□ -1.69
SNHG1-217ENST00000541578 ABCC3O15438 1527 aa4.46□□□□□ -1.69
SNHG1-217ENST00000541578 ALKQ9UM73 1620 aa4.46□□□□□ -1.69
SNHG1-217ENST00000541578 XIRP1Q702N8 1843 aaKnown RBP4.46□□□□□ -1.69
SNHG1-217ENST00000541578 CCNB3Q8WWL7 1395 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 NPIPB15A6NHN6 443 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 NPIPB13A6NJU9 1138 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 NPIPB5A8MRT5 1133 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 NPIPB4C9JG80 1138 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 TNFSF14O43557 240 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 CEP104O60308 925 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 MOSPD3O75425 235 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 URODP06132 367 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms