RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CAPN6Q9Y6Q1 641 aa4.77□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3DA0A087WVF3 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3IA0A087WXS9 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3EA0A087X179 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3KA0A087X1G2 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC187A0A096LP49 1063 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 LY6G6EA0A0G2JKS1 128 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 SLC12A8A0AV02 714 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TARSL2A2RTX5 802 aaKnown RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3FA6NER0 549 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 WASH4PA8MWX3 477 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3LB9A6J9 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 PRAMEF26H0Y7S4 382 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 K7ESM1 405 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 SCAMP1O15126 338 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 FFAR2O15552 330 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 SLC7A4O43246 635 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 NOBOXO60393 691 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 PIAS2O75928 621 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 LATS1O95835 1130 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 ASLP04424 464 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3HP0C7X1 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 FAM200BP0CF97 657 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 DLATP10515 647 aaKnown RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC130P13994 396 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TNNI1P19237 187 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 C5AR1P21730 350 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TGM2P21980 687 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 SLC8A1P32418 973 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 LONP1P36776 959 aaKnown RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 ETV3P41162 512 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 CASRP41180 1078 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 MYL6P60660 151 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 PPP2CBP62714 309 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 PPP2CAP67775 309 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 IRX6P78412 446 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 EFEMP1Q12805 493 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 MORC3Q14149 939 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 NCAPHQ15003 741 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 PSMD6Q15008 389 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 IGFBP7Q16270 282 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 PPP2R5EQ16537 467 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 MPP7Q5T2T1 576 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 C9orf64Q5T6V5 341 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3GQ6DHY5 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3CQ6IPX1 549 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 UNC5AQ6ZN44 842 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 CLEC20AQ6ZU45 233 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 C14orf80Q86SX3 495 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 ACOT1Q86TX2 421 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 UNC93AQ86WB7 457 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 MMAAQ8IVH4 418 aaKnown RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 RP1L1Q8IWN7 2480 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 ZC3H3Q8IXZ2 948 aaKnown RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D3Q8IZP1 549 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 ARHGAP18Q8N392 663 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 MFSD4AQ8N468 514 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 AADATQ8N5Z0 425 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 OR14C36Q8NHC7 312 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 RASSF8Q8NHQ8 419 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 WDR48Q8TAF3 677 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 IFI44Q8TCB0 444 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 FAM131CQ96AQ9 280 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 DNAJC19Q96DA6 116 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TMA16Q96EY4 203 aaKnown RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 APOLD1Q96LR9 279 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TM9SF2Q99805 663 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 EPN3Q9H201 632 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TNKS2Q9H2K2 1166 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 MTG2Q9H4K7 406 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 SMYD3Q9H7B4 428 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 CELSR2Q9HCU4 2923 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 UCKL1Q9NWZ5 548 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 MARCH2Q9P0N8 246 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 TBC1D7Q9P0N9 293 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 ANAPC2Q9UJX6 822 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 PCDHB10Q9UN67 800 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 LIMCH1Q9UPQ0 1083 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 U3KQA8 63 aa4.76□□□□□ -1.65
SNHG1-214ENST00000540865 SETD2Q9BYW2 2564 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-214ENST00000540865 CKAP5Q14008 2032 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 UBE4BO95155 1302 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 EDDM13A0A1B0GTR0 161 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 FRMD3A2A2Y4 597 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 EME2A4GXA9 379 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 H3BS24 57 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 TMX2-CTNND1H3BSU7 103 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SMAD7O15105 426 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 STX6O43752 255 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 CLEC3AO75596 197 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 BMP15O95972 392 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SRPRAP08240 638 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 LIPCP11150 499 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 P4HA1P13674 534 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 TRIM21P19474 475 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SLC5A2P31639 672 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 PSMD8P48556 350 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 CASP5P51878 434 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms