RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 KIAA0930Q6ICG6 404 aaPredicted RBP10.28□□□□□ -0.76
LMO3-224ENST00000540848 KLHDC10Q6PID8 442 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 KIAA0408Q6ZU52 694 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 CLNKQ7Z7G1 428 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 GALNT7Q86SF2 657 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 WDR75Q8IWA0 830 aaKnown RBP10.28□□□□□ -0.76
LMO3-224ENST00000540848 TEX26Q8N6G2 289 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 CALML6Q8TD86 181 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 PPP4R1Q8TF05 950 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 PEX13Q92968 403 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 SKA1Q96BD8 255 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 ZNF599Q96NL3 588 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 GPR22Q99680 433 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 FAM167BQ9BTA0 163 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 MCMBPQ9BTE3 642 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 TMEM120AQ9BXJ8 343 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 GPR62Q9BZJ7 368 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 SNX15Q9NRS6 342 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 TCAF1Q9Y4C2 921 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 GREB1Q4ZG55 1949 aa10.28□□□□□ -0.76
LMO3-224ENST00000540848 HEATR9A2RTY3 570 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 USP12O75317 370 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 SNUPNO95149 360 aaKnown RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 PROCP04070 461 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 HLA-DQB2P05538 268 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 MYL4P12829 197 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 KPNA2P52292 529 aaKnown RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 HK2P52789 917 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 IL10RBQ08334 325 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 EFEMP1Q12805 493 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 SF3A3Q12874 501 aaKnown RBP eCLIP10.27□□□□□ -0.76
LMO3-224ENST00000540848 TAF10Q12962 218 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 MGAT5BQ3V5L5 792 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 C5orf22Q49AR2 442 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 FASTKD1Q53R41 847 aaKnown RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 TAF1BQ53T94 588 aaPredicted RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 HSP90AA5PQ58FG0 334 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 C10orf120Q5SQS8 335 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 TMCO4Q5TGY1 634 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 MARC1Q5VT66 337 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 SLC8B1Q6J4K2 584 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 FSTL4Q6MZW2 842 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 RANBP10Q6VN20 620 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 OTOP3Q7RTS5 596 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 TBC1D1Q86TI0 1168 aaPredicted RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 LMNTD2Q8IXW0 634 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 UNC5BQ8IZJ1 945 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 DCLK2Q8N568 766 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.27□□□□□ -0.76
LMO3-224ENST00000540848 ATAD1Q8NBU5 361 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 PLPP7Q8NBV4 271 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 IPMKQ8NFU5 416 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 AZIN2Q96A70 460 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 IMP4Q96G21 291 aaKnown RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 SCARF2Q96GP6 870 aaPredicted RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 VPS39Q96JC1 886 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 C12orf65Q9H3J6 166 aaKnown RBP10.27□□□□□ -0.76
LMO3-224ENST00000540848 KCNK13Q9HB14 408 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 SP110Q9HB58 689 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 COPG2Q9UBF2 871 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 MTRRQ9UBK8 725 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 GGT7Q9UJ14 662 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 DCTN4Q9UJW0 460 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 PSAT1Q9Y617 370 aa10.27□□□□□ -0.76
LMO3-224ENST00000540848 NYNRINQ9P2P1 1898 aaKnown RBP10.27□□□□□ -0.77
LMO3-224ENST00000540848 TMEM114B3SHH9 223 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 RAMP2O60895 175 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 MYL2P10916 166 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 CALB2P22676 271 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 PTPN4P29074 926 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 PPP3CCP48454 512 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 PGFP49763 221 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 ASPHQ12797 758 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 OVGP1Q12889 678 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 GPNMBQ14956 572 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 TLR1Q15399 786 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 USP41Q3LFD5 358 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 MBLAC2Q68D91 279 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 DENND5AQ6IQ26 1287 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 ARHGAP36Q6ZRI8 547 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 ANKRD33Q7Z3H0 272 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 C14orf80Q86SX3 495 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 CLEC14AQ86T13 490 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 MTDHQ86UE4 582 aaKnown RBP10.26□□□□□ -0.77
LMO3-224ENST00000540848 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 CFAP61Q8NHU2 1237 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 RFWD2Q8NHY2 731 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 RHBDD1Q8TEB9 315 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 STON2Q8WXE9 905 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 MFSD3Q96ES6 412 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 TOX2Q96NM4 488 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 PGLYRP2Q96PD5 576 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 SEPT5Q99719 369 aaPredicted RBP10.26□□□□□ -0.77
LMO3-224ENST00000540848 FICDQ9BVA6 458 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 NOL6Q9H6R4 1146 aaKnown RBP10.26□□□□□ -0.77
LMO3-224ENST00000540848 ATP13A1Q9HD20 1204 aa10.26□□□□□ -0.77
LMO3-224ENST00000540848 ALG13Q9NP73 1137 aaKnown RBP10.26□□□□□ -0.77
LMO3-224ENST00000540848 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
LMO3-224ENST00000540848 CHRAC1Q9NRG0 131 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms