RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MAIP1Q8WWC4 291 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 HTR3CQ8WXA8 447 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 ARRDC3Q96B67 414 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 ZNF641Q96N77 438 aaPredicted RBP15.69■□□□□ 0.1
DDB1-218ENST00000540784 KLHL32Q96NJ5 620 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 AGAP3Q96P47 875 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 QKIQ96PU8 341 aaKnown RBP eCLIP15.69■□□□□ 0.1
DDB1-218ENST00000540784 SEMA3CQ99985 751 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 FAM118BQ9BPY3 351 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 MGME1Q9BQP7 344 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 HDAC8Q9BY41 377 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 FRMD8P1Q9BZ68 369 aaPredicted RBP15.69■□□□□ 0.1
DDB1-218ENST00000540784 POLR1EQ9GZS1 481 aaKnown RBP15.69■□□□□ 0.1
DDB1-218ENST00000540784 BTBD1Q9H0C5 482 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 SEMA4AQ9H3S1 761 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 SUV39H2Q9H5I1 410 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 ATP13A3Q9H7F0 1226 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 SGK2Q9HBY8 427 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 NOD2Q9HC29 1040 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 CD93Q9NPY3 652 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 WSB2Q9NYS7 404 aaPredicted RBP15.69■□□□□ 0.1
DDB1-218ENST00000540784 MBD1Q9UIS9 605 aaPredicted RBP15.69■□□□□ 0.1
DDB1-218ENST00000540784 FZD4Q9ULV1 537 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 ATP8A1Q9Y2Q0 1164 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 TTLL3Q9Y4R7 772 aa15.69■□□□□ 0.1
DDB1-218ENST00000540784 ARIH1Q9Y4X5 557 aaPredicted RBP15.69■□□□□ 0.1
DDB1-218ENST00000540784 NYNRINQ9P2P1 1898 aaKnown RBP15.69■□□□□ 0.1
DDB1-218ENST00000540784 CKAP5Q14008 2032 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 RNF103O00237 685 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 PLK4O00444 970 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 ZNF189O75820 626 aaPredicted RBP15.68■□□□□ 0.1
DDB1-218ENST00000540784 RHOBTB1O94844 696 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 FGGP02679 453 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 CR2P20023 1033 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 RBL1P28749 1068 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 SERPINA4P29622 427 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 DRD3P35462 400 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 FBXL19Q6PCT2 694 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 PRR23BQ6ZRT6 265 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 ERN2Q76MJ5 926 aaKnown RBP15.68■□□□□ 0.1
DDB1-218ENST00000540784 LPCAT2Q7L5N7 544 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 CAMK1DQ8IU85 385 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.68■□□□□ 0.1
DDB1-218ENST00000540784 PAF1Q8N7H5 531 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 CNTD1Q8N815 330 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 OR14C36Q8NHC7 312 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 HCAR2Q8TDS4 363 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 VAT1Q99536 393 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 C10orf88Q9H8K7 445 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 FAM86C1Q9NVL1 165 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 SERGEFQ9UGK8 458 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 RAPGEFL1Q9UHV5 662 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 RAB23Q9ULC3 237 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 SNX12Q9UMY4 172 aa15.68■□□□□ 0.1
DDB1-218ENST00000540784 R3HDM2Q9Y2K5 976 aaKnown RBP15.68■□□□□ 0.1
DDB1-218ENST00000540784 BCLAF3A2AJT9 711 aaKnown RBP15.67■□□□□ 0.1
DDB1-218ENST00000540784 CTAGE9A4FU28 777 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 C16orf96A6NNT2 1141 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 SLC7A4O43246 635 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 GJB3O75712 270 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 PIGNO95427 931 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 HLA-DQB2P05538 268 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 BCKDHBP21953 392 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 ITGB7P26010 798 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 PTPN3P26045 913 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 ACSL1P33121 698 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 RPL6Q02878 288 aaKnown RBP15.67■□□□□ 0.1
DDB1-218ENST00000540784 WASHC5Q12768 1159 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 ZBTB17Q13105 803 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 ELF2Q15723 593 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 CFAP58Q5T655 872 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 PID1Q7Z2X4 250 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 TTC7BQ86TV6 843 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 DEFB119Q8N690 84 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 VOPP1Q96AW1 172 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 ZC3H10Q96K80 434 aaKnown RBP15.67■□□□□ 0.1
DDB1-218ENST00000540784 TEKT5Q96M29 485 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 WDR24Q96S15 920 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 OSBPL9Q96SU4 736 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 NAPGQ99747 312 aaPredicted RBP15.67■□□□□ 0.1
DDB1-218ENST00000540784 GPR174Q9BXC1 333 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 CEP41Q9BYV8 373 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 DKK3Q9UBP4 350 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 TRHDEQ9UKU6 1024 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 PCDHGC4Q9Y5F7 938 aa15.67■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3DA0A087WVF3 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3IA0A087WXS9 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3EA0A087X179 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3KA0A087X1G2 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3FA6NER0 549 aaPredicted RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 FAM47DPA6NHR8 397 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 LRRC72A6NJI9 287 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3LB9A6J9 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 KCNN4O15554 427 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 STK10O94804 968 aaKnown RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 SEMA4FO95754 770 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3HP0C7X1 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TIMP2P16035 220 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 PRLRP16471 622 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms