RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 HNRNPA1P09651 372 aaKnown RBP eCLIP17.35■□□□□ 0.37
LTBR-207ENST00000539925 EN2P19622 333 aaPredicted RBP17.35■□□□□ 0.37
LTBR-207ENST00000539925 EPHA5P54756 1037 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 MAXP61244 160 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 NSUN2Q08J23 767 aaKnown RBP eCLIP17.35■□□□□ 0.37
LTBR-207ENST00000539925 ARHGAP15Q53QZ3 475 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 TXNDC8Q6A555 127 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 PGBD5Q8N414 524 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.35■□□□□ 0.37
LTBR-207ENST00000539925 GBP7Q8N8V2 638 aaPredicted RBP17.35■□□□□ 0.37
LTBR-207ENST00000539925 ZNF557Q8N988 423 aaPredicted RBP17.35■□□□□ 0.37
LTBR-207ENST00000539925 ZNF398Q8TD17 642 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 ATXN3LQ9H3M9 355 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 IARS2Q9NSE4 1012 aaKnown RBP17.35■□□□□ 0.37
LTBR-207ENST00000539925 PCMTD2Q9NV79 361 aa17.35■□□□□ 0.37
LTBR-207ENST00000539925 PTPRSQ13332 1948 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 ANAPC1Q9H1A4 1944 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 TPP1O14773 563 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 SLC7A4O43246 635 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 GREM1O60565 184 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 TBL1XO60907 577 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 NDST3O95803 873 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 ALDOAP04075 364 aaKnown RBP17.34■□□□□ 0.37
LTBR-207ENST00000539925 POU2F2P09086 479 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 TROVE2P10155 538 aaKnown RBP eCLIP17.34■□□□□ 0.37
LTBR-207ENST00000539925 CDH18Q13634 790 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 CCDC153Q494R4 210 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 MPPE1Q53F39 396 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 TSTD2Q5T7W7 516 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 RNF219Q5W0B1 726 aaPredicted RBP17.34■□□□□ 0.37
LTBR-207ENST00000539925 CXorf57Q6NSI4 855 aaKnown RBP17.34■□□□□ 0.37
LTBR-207ENST00000539925 CCDC91Q7Z6B0 441 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 OTUD6BQ8N6M0 293 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 DCAF4L2Q8NA75 395 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 SPPL3Q8TCT6 385 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 SCG3Q8WXD2 468 aaKnown RBP17.34■□□□□ 0.37
LTBR-207ENST00000539925 PTPRN2Q92932 1015 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 USP13Q92995 863 aaPredicted RBP17.34■□□□□ 0.37
LTBR-207ENST00000539925 LBHD1Q9BQE6 289 aaPredicted RBP17.34■□□□□ 0.37
LTBR-207ENST00000539925 HTATIP2Q9BUP3 242 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 SLC13A1Q9BZW2 595 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 PHTF1Q9UMS5 762 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 ARHGAP26Q9UNA1 814 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 ANKRD6Q9Y2G4 727 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 PSAT1Q9Y617 370 aa17.34■□□□□ 0.37
LTBR-207ENST00000539925 E2F8A0AVK6 867 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 XYLBO75191 536 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 SPATA31D3P0C874 917 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 ARCN1P48444 511 aaKnown RBP17.33■□□□□ 0.37
LTBR-207ENST00000539925 IFT88Q13099 833 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 SEPT6Q14141 434 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 ZKSCAN8Q15776 578 aaPredicted RBP17.33■□□□□ 0.37
LTBR-207ENST00000539925 FSTL4Q6MZW2 842 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 ADAMTS19Q8TE59 1207 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 POF1BQ8WVV4 589 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 NUDCD1Q96RS6 583 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 GPR22Q99680 433 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 MCMBPQ9BTE3 642 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 C2orf49Q9BVC5 232 aaPredicted RBP17.33■□□□□ 0.37
LTBR-207ENST00000539925 KDM4CQ9H3R0 1056 aa17.33■□□□□ 0.37
LTBR-207ENST00000539925 MROH6A6NGR9 719 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CBX4O00257 560 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 INSIG1O15503 277 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 TSPAN3O60637 253 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 VAPBO95292 243 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 TGDSO95455 350 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CYBBP04839 570 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 APOA4P06727 396 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 COL6A2P12110 1019 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 HOXB8P17481 243 aaPredicted RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 PTPN2P17706 415 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 ALDH3A1P30838 453 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CLCN4P51793 760 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 ERVFC1P60507 584 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SLC12A1Q13621 1099 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SIRPB2Q5JXA9 342 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 RNF43Q68DV7 783 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 ESRP1Q6NXG1 681 aaKnown RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 DCLK2Q8N568 766 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SLC25A41Q8N5S1 370 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 MAB21L3Q8N8X9 362 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 BRSK1Q8TDC3 778 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SREK1Q8WXA9 508 aaKnown RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 ACDQ96AP0 544 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 VPS39Q96JC1 886 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 TSNARE1Q96NA8 513 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SLC22A12Q96S37 553 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CYP2S1Q96SQ9 504 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SCUBE2Q9NQ36 999 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SNX15Q9NRS6 342 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 ATXN1LP0C7T5 689 aaKnown RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 CR2P20023 1033 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CHRNA4P43681 627 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 MAPK8P45983 427 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CYP4F8P98187 520 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SLC20A2Q08357 652 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms