RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TNKS2Q9H2K2 1166 aa16.36■□□□□ 0.21
TRAF3-204ENST00000539721 PABPC3Q9H361 631 aaKnown RBP16.36■□□□□ 0.21
TRAF3-204ENST00000539721 AP3B1O00203 1094 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 IGSF6O95976 241 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 CPP00450 1065 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 MGAT1P26572 445 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 NNMTP40261 264 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 MESP2Q0VG99 397 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 CBLBQ13191 982 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 CCDC38Q502W7 563 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 RALGPS1Q5JS13 557 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 CFAP58Q5T655 872 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 NAIF1Q69YI7 327 aaPredicted RBP16.35■□□□□ 0.21
TRAF3-204ENST00000539721 PTCRAQ6ISU1 281 aaPredicted RBP16.35■□□□□ 0.21
TRAF3-204ENST00000539721 TERB1Q8NA31 727 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 NXPE3Q969Y0 559 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 ISG20Q96AZ6 181 aaKnown RBP16.35■□□□□ 0.21
TRAF3-204ENST00000539721 LRRC39Q96DD0 335 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 IFT43Q96FT9 208 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 TTC25Q96NG3 672 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 CEP44Q9C0F1 390 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 KCNK12Q9HB15 430 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 ELOVL2Q9NXB9 296 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 SLCO3A1Q9UIG8 710 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.35■□□□□ 0.21
TRAF3-204ENST00000539721 TEX264Q9Y6I9 313 aa16.35■□□□□ 0.21
TRAF3-204ENST00000539721 SDR42E2A6NKP2 422 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 PRRT4C9JH25 899 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 RIPK2O43353 540 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 ACSL3O95573 720 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 TTC4O95801 387 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 SRPRAP08240 638 aaKnown RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 DLDP09622 509 aaKnown RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 AP1S1P61966 158 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 SNRPD1P62314 119 aaKnown RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 EIF4HQ15056 248 aaKnown RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 DLG2Q15700 870 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 PREPLQ4J6C6 727 aaPredicted RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 DGKKQ5KSL6 1271 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 UBAP2Q5T6F2 1119 aaKnown RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 DENND2CQ68D51 928 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 NCEH1Q6PIU2 408 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 RANBP10Q6VN20 620 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 AGGF1Q8N302 714 aaeCLIP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 MPP5Q8N3R9 675 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 PHTF2Q8N3S3 785 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 RYBPQ8N488 228 aaPredicted RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 SLC25A41Q8N5S1 370 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 PCDH20Q8N6Y1 951 aaKnown RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 OR2AP1Q8NGE2 309 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 FEM1CQ96JP0 617 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 MRGPRX3Q96LB0 322 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 SIGLEC10Q96LC7 697 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 WDR83Q9BRX9 315 aaKnown RBP16.34■□□□□ 0.21
TRAF3-204ENST00000539721 EPB41L4BQ9H329 900 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 BFARQ9NZS9 450 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 MAD1L1Q9Y6D9 718 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 COL4A2P08572 1712 aa16.34■□□□□ 0.21
TRAF3-204ENST00000539721 TBC1D3BA6NDS4 549 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 ZNF821O75541 412 aaPredicted RBP16.33■□□□□ 0.21
TRAF3-204ENST00000539721 SASH3O75995 380 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 GSRP00390 522 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 SOX9P48436 509 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 CSNK1DP48730 415 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 NPY2RP49146 381 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 ST8SIA6P61647 398 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 CDK18Q07002 472 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 CASC4Q6P4E1 433 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 CAPN12Q6ZSI9 719 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 IGDCC3Q8IVU1 814 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 PALM2Q8IXS6 379 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 SLC44A3Q8N4M1 653 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 CHFRQ96EP1 664 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 NSMCE3Q96MG7 304 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 SYBUQ9NX95 663 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 EVLQ9UI08 416 aaPredicted RBP16.33■□□□□ 0.21
TRAF3-204ENST00000539721 SLC8A2Q9UPR5 921 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 FAM50BQ9Y247 325 aa16.33■□□□□ 0.21
TRAF3-204ENST00000539721 MYLKQ15746 1914 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 MAP2K7O14733 419 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 ATP8B1O43520 1251 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 TIMM44O43615 452 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 ATP9BO43861 1147 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 BNIP3LO60238 219 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 APODP05090 189 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 TPH1P17752 444 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 CHRNA4P43681 627 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 MAPK8P45983 427 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 CRADDP78560 199 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 SLC29A2Q14542 456 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 SLC1A5Q15758 541 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 PTPRNQ16849 979 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 PUS10Q3MIT2 529 aaKnown RBP16.33■□□□□ 0.2
TRAF3-204ENST00000539721 DENND5AQ6IQ26 1287 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 OR6K2Q8NGY2 324 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 UHMK1Q8TAS1 419 aaKnown RBP16.33■□□□□ 0.2
TRAF3-204ENST00000539721 STAMBPL1Q96FJ0 436 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 CFAP36Q96G28 342 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 EBNA1BP2Q99848 306 aaKnown RBP16.33■□□□□ 0.2
TRAF3-204ENST00000539721 TDRD1Q9BXT4 1180 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms