RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
SCAPER-203ENST00000538941 PTGES3LE9PB15 166 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 STX16-NPEPL1H3BU86 382 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 TK2O00142 265 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 MAGEB3O15480 346 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 B4GALT4O60513 344 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PEX14O75381 377 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 SOAT2O75908 522 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PIGRP01833 764 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 LBPP18428 481 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 TKTP29401 623 aaKnown RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 GRIK1P39086 918 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 RPS9P46781 194 aaKnown RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 CD97P48960 835 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 BCAP31P51572 246 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 CLCN3P51790 818 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 FSTL1Q12841 308 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 IKBKEQ14164 716 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 AMHR2Q16671 573 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 DCAF4L1Q3SXM0 396 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 SV2CQ496J9 727 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 C15orf39Q6ZRI6 1047 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 CUZD1Q86UP6 607 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 EID3Q8N140 333 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 GAB3Q8WWW8 586 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 SIGLEC10Q96LC7 697 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 THUMPD3Q9BV44 507 aaKnown RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 FAM49AQ9H0Q0 323 aaPredicted RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PIF1Q9H611 641 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 WDCPQ9H6R7 721 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 FANCEQ9HB96 536 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ZBTB26Q9HCK0 441 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ACSS2Q9NR19 701 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 RCOR3Q9P2K3 495 aaPredicted RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 MYH11P35749 1972 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 E5RI56 91 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 NPHS1O60500 1241 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 GPIP06744 558 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PNPLA4P41247 253 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 STT3AP46977 705 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 POLD2P49005 469 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 RFTN1Q14699 578 aaPredicted RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 LCLAT1Q6UWP7 414 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 AKAP14Q86UN6 197 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 NT5DC4Q86YG4 428 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PEX5LQ8IYB4 626 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 BPIFB6Q8NFQ5 453 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ELOVL4Q9GZR5 314 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ZNF358Q9NW07 568 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 TMEM9Q9P0T7 183 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 RNF112Q9ULX5 631 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 TMA7Q9Y2S6 64 aaKnown RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 COPG1Q9Y678 874 aaKnown RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PAPPAQ13219 1627 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 FAM149AA5PLN7 773 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 HTRA2O43464 458 aaPredicted RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 AP1G1O43747 822 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 MAFO75444 373 aaPredicted RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 SEC24AO95486 1093 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 F9P00740 461 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PROZP22891 400 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 MYBPC1Q00872 1141 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ZNF252P-AS1Q0IIN9 211 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ILF2Q12905 390 aaKnown RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 BNIP3Q12983 259 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ZNF423Q2M1K9 1284 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 TMEM198Q66K66 360 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 TRAF7Q6Q0C0 670 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 CRTC3Q6UUV7 619 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 ABHD15Q6UXT9 468 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 TMEM26Q6ZUK4 368 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 YTHDF1Q9BYJ9 559 aaKnown RBP6.91□□□□□ -1.3
SCAPER-203ENST00000538941 COL18A1P39060 1754 aa6.91□□□□□ -1.3
SCAPER-203ENST00000538941 A0A0J9YYE9 177 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 HS6ST1O60243 411 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 SORBS2O94875 1100 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 CKMT2P17540 419 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 SOX6P35712 828 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 CPOXP36551 454 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 GRIA1P42261 906 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ST13P50502 369 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ZNF132P52740 706 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 OAZ1P54368 228 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 IRF9Q00978 393 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 STYK1Q6J9G0 422 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TIGD7Q6NT04 549 aaPredicted RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 SLC26A9Q7LBE3 791 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 OFCC1Q8IZS5 231 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 DNERQ8NFT8 737 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 MZB1Q8WU39 189 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TRIM63Q969Q1 353 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ULK4Q96C45 1275 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 CPB2Q96IY4 423 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TRMOQ9BU70 441 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ARHGEF4Q9NR80 690 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TJP2Q9UDY2 1190 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TNFSF13BQ9Y275 285 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms