RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FBXO38Q6PIJ6 1188 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 METTL3Q86U44 580 aaKnown RBP14.33□□□□□ -0.12
CD4-208ENST00000538827 SFTPA1Q8IWL2 248 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 SLC44A3Q8N4M1 653 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 SH2D3CQ8N5H7 860 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 PAF1Q8N7H5 531 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 OR6K2Q8NGY2 324 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 UCMAQ8WVF2 138 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 DNASE1L2Q92874 299 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 TTC17Q96AE7 1141 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 GDAP1L1Q96MZ0 367 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 PSKH2Q96QS6 385 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 APOL2Q9BQE5 337 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 LRRC40Q9H9A6 602 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 PIAS3Q9Y6X2 628 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 CCDC151A5D8V7 595 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 PRRT4C9JH25 899 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 SPECC1L-ADORA2AF8WAN1 911 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 SMAPO00193 183 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 INSIG1O15503 277 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 PSMD3O43242 534 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 USP12O75317 370 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 KAT7O95251 611 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 AP2A1O95782 977 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 FAM153BP0C7A2 387 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 CTHP32929 405 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 ARL4CP56559 192 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 SARNPP82979 210 aaKnown RBP14.32□□□□□ -0.12
CD4-208ENST00000538827 SKOR1P84550 965 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 SLC20A2Q08357 652 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 MPP3Q13368 585 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 OLIG2Q13516 323 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 HIF1AQ16665 826 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 BBS9Q3SYG4 887 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 FAM153CQ494X1 144 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 KDELC2Q7Z4H8 507 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 PHTF2Q8N3S3 785 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 ZCCHC9Q8N567 271 aaKnown RBP14.32□□□□□ -0.12
CD4-208ENST00000538827 IMP4Q96G21 291 aaKnown RBP14.32□□□□□ -0.12
CD4-208ENST00000538827 NUDCD1Q96RS6 583 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 P2RY13Q9BPV8 354 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 TBL1YQ9BQ87 522 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 HEBP1Q9NRV9 189 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 PIH1D1Q9NWS0 290 aaKnown RBP14.32□□□□□ -0.12
CD4-208ENST00000538827 ELOVL2Q9NXB9 296 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 FAM153AQ9UHL3 310 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 SLC8A2Q9UPR5 921 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 HS3ST2Q9Y278 367 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 AAR2Q9Y312 384 aaKnown RBP14.32□□□□□ -0.12
CD4-208ENST00000538827 CACNA1GO43497 2377 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 MYO10Q9HD67 2058 aa14.32□□□□□ -0.12
CD4-208ENST00000538827 ERI2A8K979 691 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 BANF1O75531 89 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 SRPRAP08240 638 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 MMP2P08253 660 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 SERPINF2P08697 491 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 DLDP09622 509 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 MAGEA6P43360 314 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 RECQLP46063 649 aaPredicted RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 SEC13P55735 322 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 WNT3AP56704 352 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 SNRPD1P62314 119 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 PFKPQ01813 784 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 TDGQ13569 410 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 EIF4HQ15056 248 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 PON2Q15165 354 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 DLG2Q15700 870 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 NAPEPLDQ6IQ20 393 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 KDELC1Q6UW63 502 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 NUDT18Q6ZVK8 323 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 Q6ZVU0 165 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 CENPUQ71F23 418 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 SRLQ86TD4 932 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 PRPF39Q86UA1 669 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 PCDH20Q8N6Y1 951 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 ZNF366Q8N895 744 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 EIF1ADQ8N9N8 165 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 ARRDC2Q8TBH0 407 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 AENQ8WTP8 325 aaKnown RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 IFT43Q96FT9 208 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 MRGPRX3Q96LB0 322 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 SERPINB12Q96P63 405 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 CEP44Q9C0F1 390 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 NOD2Q9HC29 1040 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 SAYSD1Q9NPB0 183 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 EVLQ9UI08 416 aaPredicted RBP14.31□□□□□ -0.12
CD4-208ENST00000538827 SLCO3A1Q9UIG8 710 aa14.31□□□□□ -0.12
CD4-208ENST00000538827 DYNC1I1O14576 645 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 TP73O15350 636 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 PIGNO95427 931 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 GSRP00390 522 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 SRFP11831 508 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 H2AFXP16104 143 aaPredicted RBP14.3□□□□□ -0.12
CD4-208ENST00000538827 CR2P20023 1033 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 GRIA1P42261 906 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 GRIA2P42262 883 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 SESN2P58004 480 aaPredicted RBP14.3□□□□□ -0.12
CD4-208ENST00000538827 AP1S1P61966 158 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 PDIA2Q13087 525 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms