RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 GNA13Q14344 377 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 SQLEQ14534 574 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 CYBRD1Q53TN4 286 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 CCBE1Q6UXH8 406 aaPredicted RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 MON1BQ7L1V2 547 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 C10orf107Q8IVU9 208 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 UBQLNLQ8IYU4 475 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 TTLQ8NG68 377 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 SGCDQ92629 289 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 TMEM80Q96HE8 168 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 GDF15Q99988 308 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 KCTD14Q9BQ13 255 aaPredicted RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 SH2D3AQ9BRG2 576 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 MUC3BQ9H195 1237 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 SPAG4Q9NPE6 437 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 FARSBQ9NSD9 589 aaKnown RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 VTI1BQ9UEU0 232 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 EMCNQ9ULC0 261 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 USTQ9Y2C2 406 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 HCN4Q9Y3Q4 1203 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 CYP3A7-CYP3A51PA0A087WV96 503 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 TCRBV7S3A2A0A539 114 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 OR5K4A6NMS3 321 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 E7ENX8 843 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 STX16-NPEPL1H3BU86 382 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 TBX3O15119 743 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 SERPINI2O75830 405 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 DBTP11182 482 aaKnown RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 ATF4P18848 351 aaPredicted RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 ATF6P18850 670 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 CYP3A7P24462 503 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 GBE1Q04446 702 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 TOP3AQ13472 1001 aaPredicted RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 ZNF484Q5JVG2 852 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 CLVS2Q5SYC1 327 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 STEAP3Q658P3 488 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 LYPD8Q6UX82 237 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 ZNF438Q7Z4V0 828 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 EPHX4Q8IUS5 362 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 UNC45BQ8IWX7 931 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 HDAC2Q92769 488 aaKnown RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 SH3KBP1Q96B97 665 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 OR52B2Q96RD2 323 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 ACO2Q99798 780 aaKnown RBP12.55□□□□□ -0.4
USP3-203ENST00000538686 ZSCAN5AQ9BUG6 496 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 KIFC1Q9BW19 673 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 ING2Q9H160 280 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 ADNPQ9H2P0 1102 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 IFT22Q9H7X7 185 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 HPS4Q9NQG7 708 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 STOML2Q9UJZ1 356 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 VWA7Q9Y334 891 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 PCDHGA7Q9Y5G6 932 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 SNX5Q9Y5X3 404 aa12.55□□□□□ -0.4
USP3-203ENST00000538686 PTPRFP10586 1907 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 FAM159BA6NKW6 160 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 CXorf49A8MYA2 514 aaPredicted RBP12.54□□□□□ -0.4
USP3-203ENST00000538686 KPNA7A9QM74 516 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 TOR1BO14657 336 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 HDAC3O15379 428 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 HTR1BP28222 390 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 CSTF2P33240 577 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP3-203ENST00000538686 CDKN2BP42772 138 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 RPS9P46781 194 aaKnown RBP12.54□□□□□ -0.4
USP3-203ENST00000538686 BLVRAP53004 296 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 ADARB1P78563 741 aaKnown RBP12.54□□□□□ -0.4
USP3-203ENST00000538686 S100A12P80511 92 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 ZNF45Q02386 682 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 PPP3CAQ08209 521 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 DPYSL3Q14195 570 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 TBCELQ5QJ74 424 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 MROH9Q5TGP6 573 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 PRR23BQ6ZRT6 265 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 VN1R5Q7Z5H4 357 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 NOXA1Q86UR1 476 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 ADGRG5Q8IZF4 528 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 OFCC1Q8IZS5 231 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 HERVK_113Q902F9 699 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
USP3-203ENST00000538686 KAT5Q92993 513 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 NT5C1BQ96P26 610 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 ILKAPQ9H0C8 392 aaPredicted RBP12.54□□□□□ -0.4
USP3-203ENST00000538686 WASH6PQ9NQA3 447 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 ANAPC2Q9UJX6 822 aa12.54□□□□□ -0.4
USP3-203ENST00000538686 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
USP3-203ENST00000538686 TCP10L2B9ZVM9 353 aa12.53□□□□□ -0.4
USP3-203ENST00000538686 H3BMM5 538 aa12.53□□□□□ -0.4
USP3-203ENST00000538686 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
USP3-203ENST00000538686 ADRA2BP18089 450 aa12.53□□□□□ -0.4
USP3-203ENST00000538686 PSMA4P25789 261 aaKnown RBP12.53□□□□□ -0.4
USP3-203ENST00000538686 GCLMP48507 274 aa12.53□□□□□ -0.4
USP3-203ENST00000538686 SERPINH1P50454 418 aaKnown RBP12.53□□□□□ -0.4
USP3-203ENST00000538686 CNTNAP1P78357 1384 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms