RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 FBXO10Q9UK96 956 aa10.8□□□□□ -0.68
TNFRSF1A-211ENST00000538363 INTS6Q9UL03 887 aaKnown RBP10.8□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RAB21Q9UL25 225 aa10.8□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CXorf51AA0A1B0GTR3 108 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 OTOL1A6NHN0 477 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SDR42E2A6NKP2 422 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MAN2B1O00754 1011 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RNASEH1O60930 286 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ZMPSTE24O75844 475 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 AP2A1O95782 977 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MT-CYBP00156 380 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 AGTP01019 485 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SRFP11831 508 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NFKBIAP25963 317 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SERPINA4P29622 427 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CD68P34810 354 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 OPRD1P41143 372 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TNFRSF4P43489 277 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NPY2RP49146 381 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 AP1S1P61966 158 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CDH17Q12864 832 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SEPT6Q14141 434 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 KCNJ11Q14654 390 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GRM3Q14832 879 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PON2Q15165 354 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MYLK3Q32MK0 819 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RALGPS1Q5JS13 557 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ANKRD22Q5VYY1 191 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DENND2CQ68D51 928 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 C22orf39Q6P5X5 142 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DSG4Q86SJ6 1040 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ADHFE1Q8IWW8 467 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ETFBKMTQ8IXQ9 262 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ZBED8Q8IZ13 594 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CHPFQ8IZ52 775 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NAT8LQ8N9F0 302 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MCUQ8NE86 351 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 OR2AP1Q8NGE2 309 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 OR52K1Q8NGK4 314 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 OR6K2Q8NGY2 324 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FAM3CQ92520 227 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PRCCQ92733 491 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CHFRQ96EP1 664 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 IMP4Q96G21 291 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CCDC77Q9BR77 488 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ACBD3Q9H3P7 528 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ATP13A3Q9H7F0 1226 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 VPS37BQ9H9H4 285 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NOD2Q9HC29 1040 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DYRK4Q9NR20 520 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HEBP1Q9NRV9 189 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PRKAG3Q9UGI9 489 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SLCO3A1Q9UIG8 710 aa10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MYO18AQ92614 2054 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-211ENST00000538363 KIF26AQ9ULI4 1882 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 EDDM13A0A1B0GTR0 161 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TTC34A8MYJ7 566 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 EIF3HO15372 352 aaKnown RBP eCLIP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SMAD6O43541 496 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ATP9BO43861 1147 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 USP12O75317 370 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PPFIA2O75334 1257 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PEX11BO96011 259 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GSRP00390 522 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 EPHX1P07099 455 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GLULP15104 373 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DRD1P21728 446 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 IVDP26440 423 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CTHP32929 405 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PHBP35232 272 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PMS2P54278 862 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CDK18Q07002 472 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 IFFO1Q0D2I5 559 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NIPAL4Q0D2K0 466 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 LAMB3Q13751 1172 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SLC44A4Q53GD3 710 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ARMC12Q5T9G4 340 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RNF43Q68DV7 783 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 LRRC8BQ6P9F7 803 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TPRG1Q6ZUI0 275 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 Q6ZVU0 165 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HDXQ7Z353 690 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TRMT11Q7Z4G4 463 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PGBD5Q8N414 524 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ZNF513Q8N8E2 541 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PPHLN1Q8NEY8 458 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 LPCAT1Q8NF37 534 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 OR8D1Q8WZ84 308 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SEC14L1Q92503 715 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ISG20Q96AZ6 181 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CFAP36Q96G28 342 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MSANTD3Q96H12 275 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SHDQ96IW2 340 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 LMLNQ96KR4 655 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MGME1Q9BQP7 344 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HEPHQ9BQS7 1158 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TRPV5Q9NQA5 729 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 LHX3Q9UBR4 397 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms