RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 MAGEA12P43365 314 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 SLC11A2P49281 568 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 USP10Q14694 798 aaKnown RBP17.65■□□□□ 0.42
SNX17-210ENST00000537606 C16orf59Q7L2K0 433 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 SLC41A1Q8IVJ1 513 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 UNKQ9C0B0 810 aaKnown RBP17.65■□□□□ 0.42
SNX17-210ENST00000537606 CPSF2Q9P2I0 782 aaKnown RBP17.65■□□□□ 0.42
SNX17-210ENST00000537606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.64■□□□□ 0.42
SNX17-210ENST00000537606 AURKAO14965 403 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 PRAMEF11O60813 436 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 SLC1A2P43004 574 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 MAPKAPK2P49137 400 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 SERPINH1P50454 418 aaKnown RBP17.64■□□□□ 0.42
SNX17-210ENST00000537606 CSE1LP55060 971 aaKnown RBP17.64■□□□□ 0.42
SNX17-210ENST00000537606 THOC5Q13769 683 aaKnown RBP17.64■□□□□ 0.42
SNX17-210ENST00000537606 ZNF470Q6ECI4 717 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 RNF135Q8IUD6 432 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 CRLF3Q8IUI8 442 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 MFSD6LQ8IWD5 586 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 SPATA6LQ8N4H0 392 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 INPP5DQ92835 1189 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 MOCOSQ96EN8 888 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 EBF4Q9BQW3 602 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 ACSS2Q9NR19 701 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 TREX1Q9NSU2 369 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 COPG2Q9UBF2 871 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 KCTD3Q9Y597 815 aa17.64■□□□□ 0.42
SNX17-210ENST00000537606 MIA3Q5JRA6 1907 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 BUD23O43709 281 aaKnown RBP17.64■□□□□ 0.41
SNX17-210ENST00000537606 ARRB2P32121 409 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 CPA2P48052 419 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 YBEYP58557 167 aaPredicted RBP17.64■□□□□ 0.41
SNX17-210ENST00000537606 ZNF235Q14590 738 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 SIRPB2Q5JXA9 342 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 STXBP5Q5T5C0 1151 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 DNAJB7Q7Z6W7 309 aaPredicted RBP17.64■□□□□ 0.41
SNX17-210ENST00000537606 FAM13CQ8NE31 585 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 PDZD8Q8NEN9 1154 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 ISL2Q96A47 359 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 PTCD3Q96EY7 689 aaKnown RBP17.64■□□□□ 0.41
SNX17-210ENST00000537606 PPP1R2P1Q96PQ5 205 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 RAB3IPQ96QF0 476 aaPredicted RBP17.64■□□□□ 0.41
SNX17-210ENST00000537606 SLC22A12Q96S37 553 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 CDK5RAP1Q96SZ6 601 aaKnown RBP17.64■□□□□ 0.41
SNX17-210ENST00000537606 TRPC7Q9HCX4 862 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 SAR1AQ9NR31 198 aa17.64■□□□□ 0.41
SNX17-210ENST00000537606 TRIM43BA6NCK2 446 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 PIRTP0C851 137 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 PTPN4P29074 926 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 GNA12Q03113 381 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 ITGA9Q13797 1035 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 INSCQ1MX18 579 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 SNX30Q5VWJ9 437 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 OTOP2Q7RTS6 562 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 CCDC91Q7Z6B0 441 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 TRIM43Q96BQ3 446 aaPredicted RBP17.63■□□□□ 0.41
SNX17-210ENST00000537606 EXOC2Q96KP1 924 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 GPR22Q99680 433 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 RHOJQ9H4E5 214 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 AGO1Q9UL18 857 aaKnown RBP17.63■□□□□ 0.41
SNX17-210ENST00000537606 URODP06132 367 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 CPA3P15088 417 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 GM2AP17900 193 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 GLRBP48167 497 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 WDR5P61964 334 aaKnown RBP17.63■□□□□ 0.41
SNX17-210ENST00000537606 GALNT3Q14435 633 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 PTPRCAPQ14761 206 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 ACCSLQ4AC99 568 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 ZNF789Q5FWF6 425 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 FATE1Q969F0 183 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 ARNT2Q9HBZ2 717 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 ATP13A1Q9HD20 1204 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 VPS45Q9NRW7 570 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 THAP1Q9NVV9 213 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 KCNK4Q9NYG8 393 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 DNAJC16Q9Y2G8 782 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 PDE4DIPQ5VU43 2346 aa17.63■□□□□ 0.41
SNX17-210ENST00000537606 H3BNC9 293 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 MPOP05164 745 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 HOXD9P28356 352 aaPredicted RBP17.62■□□□□ 0.41
SNX17-210ENST00000537606 ELF1P32519 619 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 SLC1A6P48664 564 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 MSLNQ13421 630 aaPredicted RBP17.62■□□□□ 0.41
SNX17-210ENST00000537606 TMCO4Q5TGY1 634 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 PTAR1Q7Z6K3 402 aaPredicted RBP17.62■□□□□ 0.41
SNX17-210ENST00000537606 LDB1Q86U70 411 aaPredicted RBP17.62■□□□□ 0.41
SNX17-210ENST00000537606 TREML1Q86YW5 311 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 CEP97Q8IW35 865 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 GPATCH11Q8N954 259 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 BHMTQ93088 406 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 POLR1EQ9GZS1 481 aaKnown RBP17.62■□□□□ 0.41
SNX17-210ENST00000537606 PDFQ9HBH1 243 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 SPG21Q9NZD8 308 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 TLK1Q9UKI8 766 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 HEATR9A2RTY3 570 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 C1orf53Q5VUE5 145 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 TPGS2Q68CL5 300 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 NEPROQ6NW34 567 aa17.62■□□□□ 0.41
SNX17-210ENST00000537606 RINLQ6ZS11 566 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms