RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 IRF5Q13568 498 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 FSCN1Q16658 493 aaKnown RBP11□□□□□ -0.65
CLSTN3-207ENST00000537408 PIGGQ5H8A4 983 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 ACAD10Q6JQN1 1059 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 DRICH1Q6PGQ1 229 aaPredicted RBP11□□□□□ -0.65
CLSTN3-207ENST00000537408 DCUN1D2Q6PH85 259 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 ZBTB8OSQ8IWT0 167 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 DEPDC4Q8N2C3 294 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 SEPT1Q8WYJ6 367 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 SEPT8Q92599 483 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 MS4A4AQ96JQ5 239 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 CEP19Q96LK0 163 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 NUP50Q9UKX7 468 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 SLC37A4O43826 429 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ETS1P14921 441 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 IL12AP29459 219 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 MSX2P35548 267 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 HADHAP40939 763 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 NFX1Q12986 1120 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 KLF1Q13351 362 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 POU6F1Q14863 301 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 FBXO16Q8IX29 292 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 PSMA8Q8TAA3 256 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 MAP6Q96JE9 813 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 TMEM117Q9H0C3 514 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ATP13A3Q9H7F0 1226 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 XPO7Q9UIA9 1087 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 POLHQ9Y253 713 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 SCN4AP35499 1836 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 TRIM64BA6NI03 449 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 GARTP22102 1010 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 PIK3R1P27986 724 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 TYSND1Q2T9J0 566 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 OR13F1Q8NGS4 319 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 PCDHB18PQ96TA0 734 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ING2Q9H160 280 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 RIOX1Q9H6W3 641 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ABCB10Q9NRK6 738 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ABI2Q9NYB9 513 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 IL20Q9NYY1 176 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 MSRAQ9UJ68 235 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ASTN1O14525 1302 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 WDR64B1ANS9 1081 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 PLA2G6O60733 806 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 LYPLA1O75608 230 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 HSPA4LO95757 839 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 GABRB3P28472 473 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ADCYAP1R1P41586 468 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 MERTKQ12866 999 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 PAGE2BQ5JRK9 111 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 CAND1Q86VP6 1230 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 BRSK2Q8IWQ3 736 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 FLCNQ8NFG4 579 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 MBOAT7Q96N66 472 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 C9orf16Q9BUW7 83 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 RHOBTB2Q9BYZ6 727 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 TRIM15Q9C019 465 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 NOL11Q9H8H0 719 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 AKIP1Q9NQ31 210 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 ADPRHL2Q9NX46 363 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 SNX5Q9Y5X3 404 aa10.99□□□□□ -0.65
CLSTN3-207ENST00000537408 A0A0B4J269 797 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 H0YCG3 227 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 CYB561D2O14569 222 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 FGRP09769 529 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 ATICP31939 592 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 TUBB3Q13509 450 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 BMT2Q1RMZ1 405 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 CCNYL2Q5T2Q4 361 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 ZNF773Q6PK81 442 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 DHRSXQ8N5I4 330 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 LRRC20Q8TCA0 184 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 TOP1MTQ969P6 601 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 PMEPA1Q969W9 287 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 VMP1Q96GC9 406 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 LENG8Q96PV6 779 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 SLC29A1Q99808 456 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 ADAMTS10Q9H324 1103 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 POLE4Q9NR33 117 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 C12orf71A8MTZ7 269 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 PROSCO94903 275 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 TGFB3P10600 412 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 CRHR1P34998 444 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 SERPINB9P50453 376 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 JAK3P52333 1124 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 BST2Q10589 180 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 SLC12A1Q13621 1099 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 CBWD6Q4V339 395 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 CBWD3Q5JTY5 395 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 CBWD5Q5RIA9 395 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 PIK3R3Q92569 461 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 PAWRQ96IZ0 340 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 KIFC3Q9BVG8 833 aa10.98□□□□□ -0.65
CLSTN3-207ENST00000537408 SYTL2Q9HCH5 934 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms