RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CD44P16070 742 aaKnown RBP8.17□□□□□ -1.1
CHFR-211ENST00000535897 TSHRP16473 764 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 GKP32189 559 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 UGT1A5P35504 534 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 ABL2P42684 1182 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 CXCR3P49682 368 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 PDX1P52945 283 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 STX17P56962 302 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 PFN3P60673 137 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 GNA12Q03113 381 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 PPARDQ03181 441 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 PTK2Q05397 1052 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 EIF3IQ13347 325 aaKnown RBP8.17□□□□□ -1.1
CHFR-211ENST00000535897 POLD3Q15054 466 aaPredicted RBP8.17□□□□□ -1.1
CHFR-211ENST00000535897 LRRC73Q5JTD7 316 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 TTI2Q6NXR4 508 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 SLC26A9Q7LBE3 791 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 RD3Q7Z3Z2 195 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 B3GNT8Q7Z7M8 397 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 SDR16C5Q8N3Y7 309 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 WDTC1Q8N5D0 677 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 ARL10Q8N8L6 244 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 ZSCAN1Q8NBB4 408 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 DENND6BQ8NEG7 585 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 RAB7BQ96AH8 199 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 CCDC74AQ96AQ1 378 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 ARHGEF26Q96DR7 871 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 LIN37Q96GY3 246 aaPredicted RBP8.17□□□□□ -1.1
CHFR-211ENST00000535897 FAM81BQ96LP2 452 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 LENG8Q96PV6 779 aaPredicted RBP8.17□□□□□ -1.1
CHFR-211ENST00000535897 C1QTNF7Q9BXJ2 289 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 CPEB1Q9BZB8 566 aaKnown RBP8.17□□□□□ -1.1
CHFR-211ENST00000535897 PLCB1Q9NQ66 1216 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 ANLNQ9NQW6 1124 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 TMPRSS4Q9NRS4 437 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 ARHGEF38Q9NXL2 777 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 RRN3Q9NYV6 651 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 SEPT10Q9P0V9 454 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 AHCTF1Q8WYP5 2266 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 ILVBLA1L0T0 632 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 DRGXA6NNA5 263 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 BECN2A8MW95 431 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 D6RAR5 112 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 TMX2-CTNND1H3BSU7 103 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 BIN1O00499 593 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 EFSO43281 561 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ZNF821O75541 412 aaPredicted RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 TM7SF2O76062 418 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 F9P00740 461 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ITGB2P05107 769 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 CELA2BP08218 269 aaPredicted RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 ALPIP09923 528 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 LIPCP11150 499 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 SFTPCP11686 197 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 TFE3P19532 575 aaPredicted RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 IGFALSP35858 605 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 EIF4A3P38919 411 aaKnown RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 BLKP51451 505 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 INHBCP55103 352 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ARF5P84085 180 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 SLC20A2Q08357 652 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 SRSF6Q13247 344 aaKnown RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 ELOCQ15369 112 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 LINC00303Q3SY05 128 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 PTPN20Q4JDL3 420 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ZNF805Q5CZA5 627 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 MANEAQ5SRI9 462 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ACBD5Q5T8D3 534 aaPredicted RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 FAM102AQ5T9C2 384 aaPredicted RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 OTUD1Q5VV17 481 aaPredicted RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 TRIM65Q6PJ69 517 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ZNF783Q6ZMS7 281 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 LEKR1Q6ZMV7 388 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 MACC1Q6ZN28 852 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 VASH2Q86V25 355 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ZNF354CQ86Y25 554 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ZDHHC17Q8IUH5 632 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 HID1Q8IV36 788 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 KYQ8NBH2 561 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 PCDH19Q8TAB3 1148 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 SPATA20Q8TB22 786 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 CXorf40AQ8TE69 158 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 C1orf74Q96LT6 269 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 KLHL32Q96NJ5 620 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 TBCBQ99426 244 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 NPY6RQ99463 290 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 WRAP53Q9BUR4 548 aaKnown RBP8.16□□□□□ -1.1
CHFR-211ENST00000535897 ZYG11BQ9C0D3 744 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 CLPBQ9H078 707 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 APEX2Q9UBZ4 518 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 MAN1B1Q9UKM7 699 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 PCDHGC3Q9UN70 934 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 PCDHGA7Q9Y5G6 932 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 ACTL7AQ9Y615 435 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 TEX15Q9BXT5 2789 aa8.16□□□□□ -1.1
CHFR-211ENST00000535897 IGLV3-10A0A075B6K4 115 aa8.15□□□□□ -1.1
CHFR-211ENST00000535897 GOLGA8SH3BPF8 625 aa8.15□□□□□ -1.1
CHFR-211ENST00000535897 I6L893 689 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms