RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 TOP3BO95985 862 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 GSRP00390 522 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 SERPING1P05155 500 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 ADRB3P13945 408 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 SPINK2P20155 84 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 MIPP30301 263 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 GKP32189 559 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 NUDT1P36639 197 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 NEK3P51956 506 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 NXPH1P58417 271 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 YBEYP58557 167 aaPredicted RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 IL9RQ01113 521 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 CCDC15Q0P6D6 951 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 TRIP6Q15654 476 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 CA9Q16790 459 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 PARP15Q460N3 678 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 SETMARQ53H47 684 aaPredicted RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 NEK5Q6P3R8 708 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 PRPF39Q86UA1 669 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 HORMAD1Q86X24 394 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 GAS2L3Q86XJ1 694 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 ZNF354CQ86Y25 554 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 TMEM145Q8NBT3 493 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 OR2AP1Q8NGE2 309 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 SETD7Q8WTS6 366 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 CPLX3Q8WVH0 158 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 SKA1Q96BD8 255 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 EIF3CQ99613 913 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD4-204ENST00000535810 SNRNP25Q9BV90 132 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 KLC2Q9H0B6 622 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 DHX35Q9H5Z1 703 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 ZDHHC6Q9H6R6 413 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 LRRC19Q9H756 370 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 MRPL47Q9HD33 250 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 GDF3Q9NR23 364 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 HECAQ9UBI9 543 aaPredicted RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 PCSK1NQ9UHG2 260 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 DMTF1Q9Y222 760 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 BTBD3Q9Y2F9 522 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 CELSR3Q9NYQ7 3312 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 DOCK9Q9BZ29 2069 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 A0A087X0T9 212 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 A0A1B0GTQ1 180 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 PRAMEF26H0Y7S4 382 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 TLR4O00206 839 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 EEF2KO00418 725 aaKnown RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 PRPSAP2O60256 369 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 DFNA5O60443 496 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 RNF8O76064 485 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 FTH1P19P0C7X4 201 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 FAM228BP0C875 321 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 PRLRP16471 622 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 CASP14P31944 242 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 PCK1P35558 622 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 SNRPD1P62314 119 aaKnown RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 SERINC3Q13530 473 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 SUZ12Q15022 739 aaKnown RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 SHBQ15464 509 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 ZNF284Q2VY69 593 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 INO80DQ53TQ3 878 aaPredicted RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 SLC45A4Q5BKX6 768 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 ZNF805Q5CZA5 627 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 PRAMEF14Q5SWL7 426 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 ATXN7L2Q5T6C5 722 aaPredicted RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 ERMARDQ5T6L9 678 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 SEL1L3Q68CR1 1132 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 FBXL19Q6PCT2 694 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 RFX8Q6ZV50 586 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 PARS2Q7L3T8 475 aaKnown RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 GLRX5Q86SX6 157 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 VPS36Q86VN1 386 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 IQCHQ86VS3 1027 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 PSTKQ8IV42 348 aaKnown RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 RYBPQ8N488 228 aaPredicted RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 NPWQ8N729 165 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 MFSD2AQ8NA29 543 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 NETO2Q8NC67 525 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 CASKIN2Q8WXE0 1202 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 GATA6Q92908 595 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 LRIG1Q96JA1 1093 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 ELF4Q99607 663 aaPredicted RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 XPO4Q9C0E2 1151 aaKnown RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 THAP2Q9H0W7 228 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 PDFQ9HBH1 243 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 MYO1AQ9UBC5 1043 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 NENFQ9UMX5 172 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 CA5BQ9Y2D0 317 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 LUC7L2Q9Y383 392 aaKnown RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 PCDHB9Q9Y5E1 797 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 FADS3Q9Y5Q0 445 aa8.98□□□□□ -0.97
CHD4-204ENST00000535810 TP53BP1Q12888 1972 aaPredicted RBP8.98□□□□□ -0.97
CHD4-204ENST00000535810 C16orf96A6NNT2 1141 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 KRIT1O00522 736 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 SLC31A1O15431 190 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 SPINT1O43278 529 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 AP1G1O43747 822 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 HYAL3O43820 417 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms