RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 NR5A2O00482 541 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 CDK4P11802 303 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 CYP2B6P20813 491 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 BDNFP23560 247 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 RPL5P46777 297 aaKnown RBP14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 LILRA4P59901 499 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 CCDC153Q494R4 210 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 VPS26BQ4G0F5 336 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 SPANXN3Q5MJ09 141 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 KRT80Q6KB66 452 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 LRRC43Q8N309 656 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 OR6P1Q8NGX9 317 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 WNT8BQ93098 351 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 CDCA5Q96FF9 252 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 FBXL20Q96IG2 436 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 HAPLN3Q96S86 360 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 CDC14AQ9UNH5 594 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 RAP2CQ9Y3L5 183 aa14.05□□□□□ -0.16
LPCAT3-203ENST00000535479 TRIP12Q14669 1992 aaPredicted RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SDHDO14521 159 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 TREHO43280 583 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SUPT7LO94864 414 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 OR4Q2P0C623 313 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SMPD1P17405 629 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 FOXA1P55317 472 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SLC12A1Q13621 1099 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 DPYSQ14117 519 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 MAP7Q14244 749 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 GRM2Q14416 872 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 AAK1Q2M2I8 961 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 KIF19Q2TAC6 998 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 TWF2Q6IBS0 349 aaKnown RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 DUS1LQ6P1R4 473 aaKnown RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 TMEM135Q86UB9 458 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 KDM1BQ8NB78 822 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 C3orf58Q8NDZ4 430 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 ACMSDQ8TDX5 336 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 JADE3Q92613 823 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SLCO4A1Q96BD0 722 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 DGCR14Q96DF8 476 aaKnown RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 GPRC5DQ9NZD1 345 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SIP14410 1827 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 BOLA2-SMG1P6H3BVE0 249 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 CCDC166P0CW27 439 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 CNTFP26441 200 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 ARNTP27540 789 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 DYNC1I2Q13409 638 aaKnown RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 FASTKQ14296 549 aaKnown RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 PTPRRQ15256 657 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 HMBOX1Q6NT76 420 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 TAPT1Q6NXT6 567 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 UTS2BQ765I0 119 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 CLEC14AQ86T13 490 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 CIR1Q86X95 450 aaPredicted RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 CYGBQ8WWM9 190 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 PCED1BQ96HM7 432 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SMOQ99835 787 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 WDCPQ9H6R7 721 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 ZBTB26Q9HCK0 441 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 WDR6Q9NNW5 1121 aaKnown RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 ACOT9Q9Y305 439 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 PCDHGA7Q9Y5G6 932 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 SCAMP3O14828 347 aaKnown RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 GPC4O75487 556 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 CTBSQ01459 385 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 ZIK1Q3SY52 487 aaPredicted RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 C16orf89Q6UX73 402 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 B3GNT6Q6ZMB0 384 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 TMEM102Q8N9M5 508 aaPredicted RBP14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 TSPAN14Q8NG11 270 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 NPY6RQ99463 290 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 DRC3Q9H069 523 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 AP4S1Q9Y587 144 aa14.04□□□□□ -0.16
LPCAT3-203ENST00000535479 LTBP3Q9NS15 1303 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 UBFD1O14562 309 aaKnown RBP14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 TADA2AO75478 443 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 CYP2C9P11712 490 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 NPR3P17342 541 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 FUT4P22083 530 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 GRM5P41594 1212 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 SULT2A1Q06520 285 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 MYBPC3Q14896 1274 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 GPR158Q5T848 1215 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 ZYG11AQ6WRX3 759 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 ANKRD23Q86SG2 305 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 CLVS1Q8IUQ0 354 aaPredicted RBP14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 EFCAB1Q9HAE3 211 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 ARHGEF38Q9NXL2 777 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 PRRC2BQ5JSZ5 2229 aaKnown RBP14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 DOCK1Q14185 1865 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 H3BMM5 538 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 ACOT8O14734 319 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 DDHD2O94830 711 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 HMBSP08397 361 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 ATP6V1B2P21281 511 aa14.03□□□□□ -0.16
LPCAT3-203ENST00000535479 OXTRP30559 389 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms