RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 KLHL32Q96NJ5 620 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 FCRL3Q96P31 734 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 ANLNQ9NQW6 1124 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 WDR70Q9NW82 654 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 APOBEC3BQ9UH17 382 aaKnown RBP13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 FRYQ5TBA9 3013 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 ADAMTS20P59510 1910 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 C2CD4BA6NLJ0 364 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 K7ESM1 405 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 TPP1O14773 563 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 OPA1O60313 960 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 USP12O75317 370 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 CSO75390 466 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 RNF8O76064 485 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 ALPIP09923 528 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 FERP16591 822 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 HTR7P34969 479 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 TPI1P60174 286 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 GABREP78334 506 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 FMO1Q01740 532 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 PPARDQ03181 441 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 CCDC173Q0VFZ6 552 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 TBC1D25Q3MII6 688 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 GPR155Q7Z3F1 870 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 VPS36Q86VN1 386 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 RTL3Q8N8U3 475 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 SNIP1Q8TAD8 396 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 TTYH3Q9C0H2 523 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 UCKL1Q9NWZ5 548 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 UBA2Q9UBT2 640 aaPredicted RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 NOCTQ9UK39 431 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 ZFR2Q9UPR6 939 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 CACNA1GO43497 2377 aa13.43□□□□□ -0.26
CLSTN3-205ENST00000535452 KNL1Q8NG31 2342 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 TP53BP1Q12888 1972 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 TEX51A0A1B0GUA7 166 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 SIGLEC16A6NMB1 481 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 EIF3CLB5ME19 914 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 C10orf142B7Z368 130 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 TMX2-CTNND1H3BSU7 103 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 ZW10O43264 779 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 LZTS3O60299 673 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 TMCC1O94876 653 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 COPB1P53618 953 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 CLDN6P56747 220 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 TMPRSS3P57727 454 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 POLR2LP62875 67 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 ELOCQ15369 112 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 CDKN3Q16667 212 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 CLEC16AQ2KHT3 1053 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 TAF1BQ53T94 588 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 PRRT3Q5FWE3 981 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 RBM44Q6ZP01 1051 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 EFL1Q7Z2Z2 1120 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 KANSL1Q7Z3B3 1105 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 DNAAF5Q86Y56 855 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 PHF13Q86YI8 300 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 SLC22A18ASQ8N1D0 253 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 BBS5Q8N3I7 341 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 FSTL5Q8N475 847 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 ARL14Q8N4G2 192 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 KCNE4Q8WWG9 221 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 MCEEQ96PE7 176 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 EIF3CQ99613 913 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 CNPY3Q9BT09 278 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 C1QTNF2Q9BXJ5 285 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 GANQ9H2C0 597 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 SP110Q9HB58 689 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 FANCLQ9NW38 375 aa13.42□□□□□ -0.26
CLSTN3-205ENST00000535452 GOLGA4Q13439 2230 aaKnown RBP13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 PKD1L2Q7Z442 2459 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 PLXNB3Q9ULL4 1909 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 POM121BA6NF01 834 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 ARHGAP42A6NI28 874 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 LGALS16A8MUM7 142 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 I6L893 689 aaPredicted RBP13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 TK2O00142 265 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 TCEA3O75764 348 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 NEBLO76041 1014 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 UNGP13051 313 aaPredicted RBP13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 KELP23276 732 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 SERPINA4P29622 427 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 RFC1P35251 1148 aaPredicted RBP13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 ZNF143P52747 638 aaPredicted RBP13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 HDAC4P56524 1084 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 GSCP56915 257 aaPredicted RBP13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 ERVPABLB-1P60509 514 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 CXADRP78310 365 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 BIRC2Q13490 618 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 SPIDRQ14159 915 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 FZD2Q14332 565 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 LRRC14Q15048 493 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 DEFB133Q30KQ1 61 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 FOXR1Q6PIV2 292 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms