RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 MUC3BQ9H195 1237 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 VCX3BQ9H321 246 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 WDR41Q9HAD4 459 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 MTF2Q9Y483 593 aaPredicted RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 CEP350Q5VT06 3117 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 ALPK3Q96L96 1907 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 ASB14A6NK59 587 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 E7ENX8 843 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 CLDN5O00501 218 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 AURKAO14965 403 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 RECQL4O94761 1208 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 PGM3O95394 542 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 PIGNO95427 931 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 NFKB1P19838 968 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 TYK2P29597 1187 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 LEPRP48357 1165 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 ACADVLP49748 655 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 SULT1E1P49888 294 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 CDK9P50750 372 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 SARNPP82979 210 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 IRF5Q13568 498 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 TRIM25Q14258 630 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 R3HDM1Q15032 1099 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 ADRM1Q16186 407 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 PSMD5Q16401 504 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 MMEL1Q495T6 779 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 HSP90AA5PQ58FG0 334 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 PKN3Q6P5Z2 889 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 BNC2Q6ZN30 1099 aaPredicted RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 FIBCD1Q8N539 461 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 GOLM1Q8NBJ4 401 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 C3orf58Q8NDZ4 430 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 BHLHE22Q8NFJ8 381 aaPredicted RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 CDKL2Q92772 493 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 MRGPRX2Q96LB1 330 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 GBP5Q96PP8 586 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 CDRT15Q96T59 188 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 ILKAPQ9H0C8 392 aaPredicted RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 UNC93B1Q9H1C4 597 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 TIMMDC1Q9NPL8 285 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 ACSS2Q9NR19 701 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 AGPAT4Q9NRZ5 378 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 ZNF510Q9Y2H8 683 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 MED16Q9Y2X0 877 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 VWA7Q9Y334 891 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 DOCK3Q8IZD9 2030 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 SMIM35A0A1B0GVV1 85 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 KCNK1O00180 336 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 TRIM38O00635 465 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 USP12O75317 370 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 TNFAIP8O95379 198 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 LCP1P13796 627 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 EPHX2P34913 555 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 SLC1A2P43004 574 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 PGFP49763 221 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 ZNF135P52742 658 aaPredicted RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 NDST2P52849 883 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 EPHB1P54762 984 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 POLE2P56282 527 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 MRPS22P82650 360 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 MPP3Q13368 585 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 CYLC2Q14093 348 aaPredicted RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 TTLL4Q14679 1199 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 LRRC36Q1X8D7 754 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 ZNF789Q5FWF6 425 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 INTS11Q5TA45 600 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 BTBD8Q5XKL5 378 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 SEL1L3Q68CR1 1132 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 SETD3Q86TU7 594 aaPredicted RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 PTRH1Q86Y79 214 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 KCTD4Q8WVF5 259 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 TMIGD2Q96BF3 282 aa4.47□□□□□ -1.69
CTSC-208ENST00000533897 GMPR2Q9P2T1 348 aaKnown RBP4.47□□□□□ -1.69
CTSC-208ENST00000533897 LOC100653049A0A140TA62 436 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 KCNU1A8MYU2 1149 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 UPK1AO00322 258 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 SOCS2O14508 198 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 TNFRSF10BO14763 440 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 KRT34O76011 436 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 BAG2O95816 211 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 MYF6P23409 242 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 CCNCP24863 283 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 ACVR2AP27037 513 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 SLC7A1P30825 629 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 GNL1P36915 607 aaPredicted RBP4.46□□□□□ -1.69
CTSC-208ENST00000533897 ABCG1P45844 678 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 HSPA13P48723 471 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 NUDT2P50583 147 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 RAB10P61026 200 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 MPP1Q00013 466 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 SLC12A1Q13621 1099 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 ZNF460Q14592 562 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 ZRSR2Q15696 482 aaKnown RBP4.46□□□□□ -1.69
CTSC-208ENST00000533897 PPP1R3AQ16821 1122 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 SLC36A3Q495N2 470 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 TMEM259Q4ZIN3 620 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 LDLRAD1Q5T700 205 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 REP15Q6BDI9 236 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 DENND6AQ8IWF6 608 aa4.46□□□□□ -1.69
CTSC-208ENST00000533897 LRRC43Q8N309 656 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms