RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 EPS8L2Q9H6S3 715 aa6.45□□□□□ -1.38
UBQLN1-206ENST00000533705 FANCEQ9HB96 536 aa6.45□□□□□ -1.38
UBQLN1-206ENST00000533705 PAPOLBQ9NRJ5 636 aaKnown RBP6.45□□□□□ -1.38
UBQLN1-206ENST00000533705 IMP3Q9NV31 184 aaKnown RBP6.45□□□□□ -1.38
UBQLN1-206ENST00000533705 CCDC167Q9P0B6 97 aa6.45□□□□□ -1.38
UBQLN1-206ENST00000533705 KLHL3Q9UH77 587 aa6.45□□□□□ -1.38
UBQLN1-206ENST00000533705 ZNF232Q9UNY5 417 aa6.45□□□□□ -1.38
UBQLN1-206ENST00000533705 FER1L4A9Z1Z3 1794 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SAC3D1A6NKF1 404 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 TPP1O14773 563 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 CLDN11O75508 207 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 ADRA1DP25100 572 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PTPN4P29074 926 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PSMD8P48556 350 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 NEK3P51956 506 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 NOMO3P69849 1222 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 RGS1Q08116 209 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 GALNT3Q14435 633 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 GRM3Q14832 879 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 TAF13Q15543 124 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 MPPE1Q53F39 396 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PPP1R15BQ5SWA1 713 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 LRRC55Q6ZSA7 311 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 ZCCHC23Q6ZST2 131 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 C16orf62Q7Z3J2 963 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 EPHX4Q8IUS5 362 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FAM20CQ8IXL6 584 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 OR14C36Q8NHC7 312 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FUCA2Q9BTY2 467 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 UGT2B28Q9BY64 529 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 BATF3Q9NR55 127 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SLC12A4Q9UP95 1085 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 TMEM131LA2VDJ0 1609 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 TRBV23OR9-2A0A075B6M9 112 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 LBPP18428 481 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 ERVK-21P61565 698 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FRG1Q14331 258 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 UBXN2BQ14CS0 331 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 RNF44Q7L0R7 432 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 GPR141Q7Z602 305 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 NPAS4Q8IUM7 802 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SLC41A1Q8IVJ1 513 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SCAIQ8N9R8 606 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 WDR36Q8NI36 951 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 NOD2Q9HC29 1040 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SLC24A3Q9HC58 644 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 INVSQ9Y283 1065 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PTPRJQ12913 1337 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FCHO1O14526 889 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FKBP6O75344 327 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PAGE1O75459 146 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 LGR5O75473 907 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 NTRK1P04629 796 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 HIST1H2ABP04908 130 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FGF1P05230 155 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SYN1P17600 705 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 RPL14P50914 215 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 AIF1P55008 147 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 MRPS35P82673 323 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FMO1Q01740 532 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 EVX2Q03828 476 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 ATP13A4Q4VNC1 1196 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 HIST3H2AQ7L7L0 130 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 RASAL3Q86YV0 1011 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 UPF1Q92900 1129 aaKnown RBP eCLIP6.44□□□□□ -1.385e-8■■■□□ 17.7
UBQLN1-206ENST00000533705 GLMNQ92990 594 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 HIST1H2ACQ93077 130 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 GMIPQ9P107 970 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 HECAQ9UBI9 543 aaPredicted RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 AP3M1Q9Y2T2 418 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 MSI1O43347 362 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 LIASO43766 372 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 LDLRP01130 860 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 HLA-DQA2P01906 255 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 ANXA6P08133 673 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SMPD1P17405 629 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SERPINB1P30740 379 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 CORO1AP31146 461 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 RPL22P35268 128 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 TALDO1P37837 337 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 SEC13P55735 322 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 TRMT5Q32P41 509 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 OTUD3Q5T2D3 398 aaPredicted RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 INTS11Q5TA45 600 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 C16orf46Q6P387 395 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 FUT10Q6P4F1 479 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 ADAMTSL2Q86TH1 951 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 BEND7Q8N7W2 519 aaPredicted RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 BSNDQ8WZ55 320 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 RNFT2Q96EX2 444 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 BTN2A3PQ96KV6 586 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 MFSD14AQ96MC6 490 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PHPT1Q9NRX4 125 aaPredicted RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 TRMT13Q9NUP7 481 aaKnown RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 ARIH1Q9Y4X5 557 aaPredicted RBP6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PCDHA2Q9Y5H9 948 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 PCDHA11Q9Y5I1 949 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 KCNE2Q9Y6J6 123 aa6.44□□□□□ -1.38
UBQLN1-206ENST00000533705 LRRC10BA6NIK2 292 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms