RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 MYLKQ15746 1914 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 BICDL2A1A5D9 508 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 ILVBLA1L0T0 632 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 LMO7DNF2Z398 122 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 AP1G1O43747 822 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 NOBOXO60393 691 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 ZMPSTE24O75844 475 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 GNA14O95837 355 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 F9P00740 461 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 RPLP0P05388 317 aaKnown RBP13.24□□□□□ -0.29
COPB1-209ENST00000533096 UGT2B4P06133 528 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 ITGA2BP08514 1039 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 JMJD7P0C870 316 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 CYP4F2P78329 520 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 ARF5P84085 180 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 GNA12Q03113 381 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 MEA1Q16626 185 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 BRMS1LQ5PSV4 323 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 OTUD1Q5VV17 481 aaPredicted RBP13.24□□□□□ -0.29
COPB1-209ENST00000533096 RWDD4Q6NW29 188 aaKnown RBP13.24□□□□□ -0.29
COPB1-209ENST00000533096 CLEC14AQ86T13 490 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 SDR16C5Q8N3Y7 309 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 CCDC74AQ96AQ1 378 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 SGF29Q96ES7 293 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 C1orf74Q96LT6 269 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 GFM1Q96RP9 751 aaKnown RBP13.24□□□□□ -0.29
COPB1-209ENST00000533096 WRAP53Q9BUR4 548 aaKnown RBP13.24□□□□□ -0.29
COPB1-209ENST00000533096 LRRC61Q9BV99 259 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 CPEB1Q9BZB8 566 aaKnown RBP13.24□□□□□ -0.29
COPB1-209ENST00000533096 STRADBQ9C0K7 418 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 PISDQ9UG56 409 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 RABGEF1Q9UJ41 708 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 STAP1Q9ULZ2 295 aa13.24□□□□□ -0.29
COPB1-209ENST00000533096 GOLGA8SH3BPF8 625 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 TM7SF2O76062 418 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 PNMA6AP0CW24 399 aaPredicted RBP13.23□□□□□ -0.29
COPB1-209ENST00000533096 PDX1P52945 283 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 INHBCP55103 352 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 MYLK3Q32MK0 819 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 C2CD6Q53TS8 623 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 ZNF805Q5CZA5 627 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 COLEC12Q5KU26 742 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 MANEAQ5SRI9 462 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 ATXN7L2Q5T6C5 722 aaPredicted RBP13.23□□□□□ -0.29
COPB1-209ENST00000533096 ENPP7Q6UWV6 458 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 ATG14Q6ZNE5 492 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 SLC26A9Q7LBE3 791 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 VASH2Q86V25 355 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 SLC47A2Q86VL8 602 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 ZFAND4Q86XD8 727 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 ZNF354CQ86Y25 554 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 WDR48Q8TAF3 677 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 JPH3Q8WXH2 748 aaPredicted RBP13.23□□□□□ -0.29
COPB1-209ENST00000533096 CENPTQ96BT3 561 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 ZYG11BQ9C0D3 744 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 CEP44Q9C0F1 390 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 DNAI1Q9UI46 699 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 GPR34Q9UPC5 381 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 PAXBP1Q9Y5B6 917 aa13.23□□□□□ -0.29
COPB1-209ENST00000533096 TENM4Q6N022 2769 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 FOXN3O00409 490 aaPredicted RBP13.22□□□□□ -0.29
COPB1-209ENST00000533096 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
COPB1-209ENST00000533096 POP4O95707 220 aaKnown RBP13.22□□□□□ -0.29
COPB1-209ENST00000533096 BMP6P22004 513 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 IGFALSP35858 605 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 PPP1R2P41236 205 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 MAPK10P53779 464 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 POLD3Q15054 466 aaPredicted RBP13.22□□□□□ -0.29
COPB1-209ENST00000533096 ELOCQ15369 112 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 KLHL40Q2TBA0 621 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 SLC25A52Q3SY17 297 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 FAM102AQ5T9C2 384 aaPredicted RBP13.22□□□□□ -0.29
COPB1-209ENST00000533096 TRIM65Q6PJ69 517 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 PHLDB2Q86SQ0 1253 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 FAM131BQ86XD5 332 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 CXorf40AQ8TE69 158 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 RAB7BQ96AH8 199 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 MAGEB5Q9BZ81 275 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 RRN3Q9NYV6 651 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 SEPT10Q9P0V9 454 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 DNAJC12Q9UKB3 198 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 HPCAL4Q9UM19 191 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 PCDHGC3Q9UN70 934 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 COQ6Q9Y2Z9 468 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 PCDHB11Q9Y5F2 797 aa13.22□□□□□ -0.29
COPB1-209ENST00000533096 TMX2-CTNND1H3BSU7 103 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 NTN3O00634 580 aaPredicted RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 FGFR1OPO95684 399 aaKnown RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 CD160O95971 181 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 ITIH1P19827 911 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 XPAP23025 273 aaPredicted RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 CLCN1P35523 988 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 SNRPD1P62314 119 aaKnown RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 YPEL5P62699 121 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 ATP11AP98196 1134 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms