RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 POLD3Q15054 466 aaPredicted RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 DEFB133Q30KQ1 61 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 CDKAL1Q5VV42 579 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 GUSBP11Q6P575 273 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 SPACA3Q8IXA5 215 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 RBFAQ8N0V3 343 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 PYROXD2Q8N2H3 581 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 CENPIQ92674 756 aaPredicted RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 RAB7BQ96AH8 199 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 NAF1Q96HR8 494 aaKnown RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 KLHL32Q96NJ5 620 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 DEPDC7Q96QD5 511 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 DUSP23Q9BVJ7 150 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 KLC2Q9H0B6 622 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 MAGEH1Q9H213 219 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 TCEAL2Q9H3H9 227 aaPredicted RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 NOL6Q9H6R4 1146 aaKnown RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 IPO11Q9UI26 975 aaKnown RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 PNMA8BQ9ULN7 279 aaPredicted RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 H3BM21 787 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 AQP9O43315 295 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 USP12O75317 370 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 TMCC1O94876 653 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 JUNDP17535 347 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 ITIH2P19823 946 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 RFC1P35251 1148 aaPredicted RBP17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 IGFALSP35858 605 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 GEMIN4P57678 1058 aaKnown RBP17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 SNRPD1P62314 119 aaKnown RBP17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 GABREP78334 506 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 TLE3Q04726 772 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 CDKN3Q16667 212 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 MYLK3Q32MK0 819 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 ZCCHC8Q6NZY4 707 aaKnown RBP17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 TRIM72Q6ZMU5 477 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 ZSCAN30Q86W11 494 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 DENND6BQ8NEG7 585 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 ENOX1Q8TC92 643 aaKnown RBP17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 MAPK15Q8TD08 544 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 LMX1AQ8TE12 382 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 USP29Q9HBJ7 922 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 HPCAL4Q9UM19 191 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 SIK3Q9Y2K2 1263 aa17.33■□□□□ 0.36
RPUSD4-207ENST00000532800 RP1P56715 2156 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 LRRK1Q38SD2 2015 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 AREL1O15033 823 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 BUB1O43683 1085 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 KDELR3O43731 214 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 C1QL1O75973 258 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 POP4O95707 220 aaKnown RBP17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 KRT3P12035 628 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 GPD1P21695 349 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 TGM2P21980 687 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 NSFP46459 744 aaKnown RBP17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 DUSP3P51452 185 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 GSCP56915 257 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 CT47A1Q5JQC4 288 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 WDR59Q6PJI9 974 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 CRTC1Q6UUV9 634 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 EFL1Q7Z2Z2 1120 aaKnown RBP17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 VPS36Q86VN1 386 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 ZNF354CQ86Y25 554 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 ASB12Q8WXK4 309 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 SLC39A7Q92504 469 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 NTAN1Q96AB6 310 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 LGMNQ99538 433 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 SELENOOQ9BVL4 669 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 OSBPL1AQ9BXW6 950 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 ABCG4Q9H172 646 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 RETREG1Q9H6L5 497 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 ADAM22Q9P0K1 906 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 CSNK1G3Q9Y6M4 447 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 ATMQ13315 3056 aa17.32■□□□□ 0.36
RPUSD4-207ENST00000532800 CPED1A4D0V7 1026 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 CASC3O15234 703 aaKnown RBP17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 ATXN7O15265 892 aaPredicted RBP17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 CCP110O43303 1012 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 MMP20O60882 483 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 STAT1P42224 750 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 C1orf61Q13536 156 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 CLEC16AQ2KHT3 1053 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 FKBP15Q5T1M5 1219 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 GDPD4Q6W3E5 623 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 TTC7BQ86TV6 843 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 RTL3Q8N8U3 475 aaKnown RBP17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 C3orf20Q8ND61 904 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 CENPTQ96BT3 561 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 HIC2Q96JB3 615 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 GDAP1L1Q96MZ0 367 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 MBNL1Q9NR56 388 aaKnown RBP17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 EVA1BQ9NVM1 165 aa17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 APOBEC3BQ9UH17 382 aaKnown RBP17.31■□□□□ 0.36
RPUSD4-207ENST00000532800 A0A1W2PNU3 283 aaPredicted RBP17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 INSIG1O15503 277 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 GCATO75600 419 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 EPHB2P29323 1055 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 THOP1P52888 689 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 PCBP4P57723 403 aaKnown RBP17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 CXADRP78310 365 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms