RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	CENPT	Q96BT3	561 aa		21.34	■■□□□ 1.01
FDFT1-220	ENST00000531733	TUBGCP2	Q9BSJ2	902 aa		21.34	■■□□□ 1.01
FDFT1-220	ENST00000531733	EME2	A4GXA9	379 aa	Predicted RBP	21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733		H3BM21	787 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	TSPAN6	O43657	245 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	UGT2B4	P06133	528 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	PRKCSH	P14314	528 aa	Predicted RBP	21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	IGFALS	P35858	605 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	CDO1	Q16878	200 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	ZNF805	Q5CZA5	627 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	ACBD5	Q5T8D3	534 aa	Predicted RBP	21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	SLC35F3	Q8IY50	421 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	EPS8L1	Q8TE68	723 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	ISG20	Q96AZ6	181 aa	Known RBP	21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	OR12D3	Q9UGF7	316 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	SALL4	Q9UJQ4	1053 aa		21.33	■■□□□ 1.01
FDFT1-220	ENST00000531733	KRIT1	O00522	736 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	AREL1	O15033	823 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	MUSK	O15146	869 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	LSM8	O95777	96 aa	Known RBP	21.32	■■□□□ 1
FDFT1-220	ENST00000531733	CELA2B	P08218	269 aa	Predicted RBP	21.32	■■□□□ 1
FDFT1-220	ENST00000531733	ADRA1B	P35368	520 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	PDX1	P52945	283 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	TPD52L1	Q16890	204 aa	Predicted RBP	21.32	■■□□□ 1
FDFT1-220	ENST00000531733	CCDC14	Q49A88	953 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	TAF1B	Q53T94	588 aa	Predicted RBP	21.32	■■□□□ 1
FDFT1-220	ENST00000531733	BROX	Q5VW32	411 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	RWDD4	Q6NW29	188 aa	Known RBP	21.32	■■□□□ 1
FDFT1-220	ENST00000531733	NYAP1	Q6ZVC0	841 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	PLPP6	Q8IY26	295 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	MLKL	Q8NB16	471 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	JOSD2	Q8TAC2	188 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	RXFP2	Q8WXD0	754 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	KLHL32	Q96NJ5	620 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	SLC46A1	Q96NT5	459 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	LRRC61	Q9BV99	259 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	BOC	Q9BWV1	1114 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	CLPB	Q9H078	707 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733	MBNL1	Q9NR56	388 aa	Known RBP	21.32	■■□□□ 1
FDFT1-220	ENST00000531733	SSUH2	Q9Y2M2	353 aa		21.32	■■□□□ 1
FDFT1-220	ENST00000531733		F8VZ95	297 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	NEMP1	O14524	444 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	MMP20	O60882	483 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	UCHL3	P15374	230 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	ADK	P55263	362 aa	Known RBP	21.31	■■□□□ 1
FDFT1-220	ENST00000531733	SKOR1	P84550	965 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	LY6D	Q14210	128 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	NR0B2	Q15466	257 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	MYLK3	Q32MK0	819 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	DPCR1	Q3MIW9	517 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	PRRT3	Q5FWE3	981 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	VPS36	Q86VN1	386 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	PHACTR4	Q8IZ21	702 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	CCDC185	Q8N715	623 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	DENND6B	Q8NEG7	585 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	OR2AP1	Q8NGE2	309 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	GPT2	Q8TD30	523 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	ASB12	Q8WXK4	309 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	TTC9	Q92623	222 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	IL12RB2	Q99665	862 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	KLC2	Q9H0B6	622 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	THSD1	Q9NS62	852 aa		21.31	■■□□□ 1
FDFT1-220	ENST00000531733	APOBEC3B	Q9UH17	382 aa	Known RBP	21.31	■■□□□ 1
FDFT1-220	ENST00000531733	NOCT	Q9UK39	431 aa	Known RBP	21.31	■■□□□ 1
FDFT1-220	ENST00000531733	TPP1	O14773	563 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	LRIG2	O94898	1065 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	GSR	P00390	522 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	KRT10	P13645	584 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	RHOQ	P17081	205 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	CHRNB2	P17787	502 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	NRG1	Q02297	640 aa	Predicted RBP	21.3	■■□□□ 1
FDFT1-220	ENST00000531733	FOXR1	Q6PIV2	292 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	IGF2-AS	Q6U949	168 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	RBM44	Q6ZP01	1051 aa	Known RBP	21.3	■■□□□ 1
FDFT1-220	ENST00000531733	ARC	Q7LC44	396 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	RAB7B	Q96AH8	199 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	NOL6	Q9H6R4	1146 aa	Known RBP	21.3	■■□□□ 1
FDFT1-220	ENST00000531733	EVA1B	Q9NVM1	165 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	TMEM248	Q9NWD8	314 aa		21.3	■■□□□ 1
FDFT1-220	ENST00000531733	MAPKAPK2	P49137	400 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	KLK7	P49862	253 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	UCN	P55089	124 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	RHD	Q02161	417 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	TCEA2	Q15560	299 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	TP53I13	Q8NBR0	393 aa	Predicted RBP	21.29	■■□□□ 1
FDFT1-220	ENST00000531733	SLC30A5	Q8TAD4	765 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	DPH1	Q9BZG8	443 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	SAMSN1	Q9NSI8	373 aa	Known RBP	21.29	■■□□□ 1
FDFT1-220	ENST00000531733	TMEM51	Q9NW97	253 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	SPAST	Q9UBP0	616 aa		21.29	■■□□□ 1
FDFT1-220	ENST00000531733	CXorf51A	A0A1B0GTR3	108 aa		21.28	■■□□□ 1
FDFT1-220	ENST00000531733	C2CD4B	A6NLJ0	364 aa		21.28	■■□□□ 1
FDFT1-220	ENST00000531733	CDRT15L2	A8MXV6	281 aa		21.28	■■□□□ 1
FDFT1-220	ENST00000531733	PES1	O00541	588 aa	Known RBP	21.28	■■□□□ 1
FDFT1-220	ENST00000531733	YY2	O15391	372 aa		21.28	■■□□□ 1
FDFT1-220	ENST00000531733	GFPT2	O94808	682 aa		21.28	■■□□□ 1
FDFT1-220	ENST00000531733	TMCC1	O94876	653 aa		21.28	■■□□□ 1
FDFT1-220	ENST00000531733	POP4	O95707	220 aa	Known RBP	21.28	■■□□□ 1
FDFT1-220	ENST00000531733	CYP1A1	P04798	512 aa	Predicted RBP	21.28	■■□□□ 1
FDFT1-220	ENST00000531733	TSHR	P16473	764 aa		21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms