RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PMPCBO75439 489 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 PIGNO95427 931 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 POP4O95707 220 aaKnown RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 SERPINF2P08697 491 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 ARSIQ5FYB1 569 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 KIAA1211LQ6NV74 962 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 NCEH1Q6PIU2 408 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 PDCD6IPQ8WUM4 868 aaKnown RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 OR8D1Q8WZ84 308 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 IMP4Q96G21 291 aaKnown RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 DPH5Q9H2P9 285 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 IL36AQ9UHA7 158 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 MMP17Q9ULZ9 603 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 PCDHGC4Q9Y5F7 938 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 RHOXF2BP0C7M4 288 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 COL9A1P20849 921 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 CES1P23141 567 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 AP1S1P61966 158 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 BCL2L1Q07817 233 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 ELAVL3Q14576 367 aaKnown RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 POM121L1PQ3SYA9 428 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 HSF5Q4G112 596 aaPredicted RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 C4orf22Q6V702 233 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 PRPF39Q86UA1 669 aaKnown RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 CAMK1DQ8IU85 385 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 LRRC45Q96CN5 670 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 OXNAD1Q96HP4 312 aaPredicted RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 NSMCE3Q96MG7 304 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 RHOXF2Q9BQY4 288 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 FAM153AQ9UHL3 310 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 AAR2Q9Y312 384 aaKnown RBP17.86■□□□□ 0.45
CTSB-222ENST00000531551 SNX24Q9Y343 169 aa17.86■□□□□ 0.45
CTSB-222ENST00000531551 ATG13O75143 517 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 LEFTY1O75610 366 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 ANXA9O76027 345 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 HEXIM1O94992 359 aaKnown RBP17.85■□□□□ 0.45
CTSB-222ENST00000531551 IL1BP01584 269 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 MMP2P08253 660 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 FDFT1P37268 417 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 MAPK8P45983 427 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 CSNK1DP48730 415 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 SKOR1P84550 965 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 GAS6Q14393 721 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 ALG1LQ6GMV1 187 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 MMAAQ8IVH4 418 aaKnown RBP17.85■□□□□ 0.45
CTSB-222ENST00000531551 PLPP6Q8IY26 295 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 PDCD7Q8N8D1 485 aaKnown RBP17.85■□□□□ 0.45
CTSB-222ENST00000531551 IPMKQ8NFU5 416 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 GORASP1Q9BQQ3 440 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 ERP44Q9BS26 406 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 OSBPL6Q9BZF3 934 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 RAB17Q9H0T7 212 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 ATP13A3Q9H7F0 1226 aa17.85■□□□□ 0.45
CTSB-222ENST00000531551 GOLGA6CA6NDK9 693 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 GOLGA6BA6NDN3 693 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 TMEM221A6NGB7 291 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 M0R296 226 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 UGT2B4P06133 528 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 CTSLP07711 333 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 APRTP07741 180 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 GOLGA6DP0CG33 693 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 GEMP55040 296 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 SPARCL1Q14515 664 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 IHHQ14623 411 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 GLE1Q53GS7 698 aaKnown RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 CFAP58Q5T655 872 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 TMEM92Q6UXU6 159 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 MLPHQ9BV36 600 aaPredicted RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 GOLGA6AQ9NYA3 693 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 RAI2Q9Y5P3 530 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 WASF2Q9Y6W5 498 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 A0A1W2PQF6 199 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 KPNA3O00505 521 aaPredicted RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 RNASEH1O60930 286 aaKnown RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 SERPINA4P29622 427 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 TNNT3P45378 269 aaPredicted RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 GUCY2DQ02846 1103 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 CAMK2GQ13555 558 aaPredicted RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 CRY1Q16526 586 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 RALGPS1Q5JS13 557 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 CWF19L1Q69YN2 538 aaKnown RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 GDPD4Q6W3E5 623 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 DSG4Q86SJ6 1040 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 IFT43Q96FT9 208 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 FAM129BQ96TA1 746 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 FSD1LQ9BXM9 530 aa17.84■□□□□ 0.45
CTSB-222ENST00000531551 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.84■□□□□ 0.452e-7■■□□□ 12.3
CTSB-222ENST00000531551 V9GYY5 206 aaPredicted RBP17.84■□□□□ 0.45
CTSB-222ENST00000531551 CHURC1-FNTBB4DL54 471 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 PI15O43692 258 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 PRNPP04156 253 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 PSMD8P48556 350 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 WNT3AP56704 352 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 TRAF2Q12933 501 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 MPP3Q13368 585 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 OLIG2Q13516 323 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 SEMA5AQ13591 1074 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 IZUMO3Q5VZ72 239 aa17.83■□□□□ 0.44
CTSB-222ENST00000531551 OR2T3Q8NH03 318 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms