RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 C1orf131Q8NDD1 294 aaKnown RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 CXorf40AQ8TE69 158 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 NELFBQ8WX92 580 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 CCDC74AQ96AQ1 378 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 KLHL32Q96NJ5 620 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 LENG8Q96PV6 779 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 KLF6Q99612 283 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 LRRC61Q9BV99 259 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 BOCQ9BWV1 1114 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 C1QTNF2Q9BXJ5 285 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 SRRTQ9BXP5 876 aaKnown RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 CLPBQ9H078 707 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 PLCB1Q9NQ66 1216 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ANLNQ9NQW6 1124 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 PIGVQ9NUD9 493 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ASNSD1Q9NWL6 643 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 STAP1Q9ULZ2 295 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 GPR34Q9UPC5 381 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ZDHHC9Q9Y397 364 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 BIN1O00499 593 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 PMM2O15305 246 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 NOBOXO60393 691 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 ZNF821O75541 412 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 DAB1O75553 588 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 TM7SF2O76062 418 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 F9P00740 461 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 SFTPCP11686 197 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 SLC9A1P19634 815 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 ITIH1P19827 911 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 ACVRL1P37023 503 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 SERPINH1P50454 418 aaKnown RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 BLKP51451 505 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 PFN3P60673 137 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 PTK2Q05397 1052 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 POLD3Q15054 466 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 ELOCQ15369 112 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 TBR1Q16650 682 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 KLHL40Q2TBA0 621 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 C5orf22Q49AR2 442 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 ZNF805Q5CZA5 627 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 BRMS1LQ5PSV4 323 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 PHF19Q5T6S3 580 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 RWDD4Q6NW29 188 aaKnown RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 XKR5Q6UX68 686 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 PCDH20Q8N6Y1 951 aaKnown RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 NETO2Q8NC67 525 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 USP7Q93009 1102 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 TMEM74Q96NL1 305 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 TBCBQ99426 244 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 WRAP53Q9BUR4 548 aaKnown RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 C1QTNF7Q9BXJ2 289 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 CEP44Q9C0F1 390 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 LRRN3Q9H3W5 708 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 MBNL1Q9NR56 388 aaKnown RBP9.38□□□□□ -0.91
NEDD8-206ENST00000531430 ARHGEF38Q9NXL2 777 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 MOSPD1Q9UJG1 213 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 HPCAL4Q9UM19 191 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 CNTN6Q9UQ52 1028 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 CTNND2Q9UQB3 1225 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 LOXL2Q9Y4K0 774 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 PAXBP1Q9Y5B6 917 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 ATP6V1DQ9Y5K8 247 aa9.38□□□□□ -0.91
NEDD8-206ENST00000531430 AHCTF1Q8WYP5 2266 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 PRAMEF33A0A0G2JMD5 474 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 BICDL2A1A5D9 508 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 ILVBLA1L0T0 632 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 GOLGA8SH3BPF8 625 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 RIOK3O14730 519 aaKnown RBP9.37□□□□□ -0.91
NEDD8-206ENST00000531430 SUV39H1O43463 412 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 AP1G1O43747 822 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 PRAMEF10O60809 474 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 GNA14O95837 355 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 TNFP01375 233 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 ALPIP09923 528 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 LIPCP11150 499 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 ITGB6P18564 788 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 IGFALSP35858 605 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 CXCR3P49682 368 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 SNRPD1P62314 119 aaKnown RBP9.37□□□□□ -0.91
NEDD8-206ENST00000531430 YPEL5P62699 121 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 ARF5P84085 180 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 APBA1Q02410 837 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 GNA12Q03113 381 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 TLE1Q04724 770 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 SRSF1Q07955 248 aaKnown RBP eCLIP9.37□□□□□ -0.91
NEDD8-206ENST00000531430 EIF3IQ13347 325 aaKnown RBP9.37□□□□□ -0.91
NEDD8-206ENST00000531430 ARHGEF7Q14155 803 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 MYLK3Q32MK0 819 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 COBLL1Q53SF7 1204 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 ATXN7L2Q5T6C5 722 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-206ENST00000531430 OLFML1Q6UWY5 402 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 ENOSF1Q7L5Y1 443 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 PHLDB2Q86SQ0 1253 aa9.37□□□□□ -0.91
NEDD8-206ENST00000531430 GKN2Q86XP6 184 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms