RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PLXNB2O15031 1838 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 LY6G6EA0A0G2JKS1 128 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 CER1O95813 267 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 BMP15O95972 392 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 IFIT2P09913 472 aaKnown RBP7.66□□□□□ -1.18
CSDE1-213ENST00000530784 CCND3P30281 292 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-213ENST00000530784 PPM1AP35813 382 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 SOX2P48431 317 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 MFSD14CQ5VZR4 134 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 UEVLDQ8IX04 471 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 ZNF366Q8N895 744 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 ACRBPQ8NEB7 543 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 PMM1Q92871 262 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 ZBTB9Q96C00 473 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 HEY2Q9UBP5 337 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 EXOC6BQ9Y2D4 811 aa7.66□□□□□ -1.18
CSDE1-213ENST00000530784 UBE2J1Q9Y385 318 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-213ENST00000530784 SLC15A5A6NIM6 579 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 CNMDO75829 334 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 NPPBP16860 134 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 SHMT1P34896 483 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 BTKQ06187 659 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 DMWDQ09019 674 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 LAMB3Q13751 1172 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 CBFBQ13951 182 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 HSP90AB4PQ58FF6 505 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 TDHQ8IZJ6 230 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 BCAS4Q8TDM0 211 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 ACER1Q8TDN7 264 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 RIOK1Q9BRS2 568 aaKnown RBP7.65□□□□□ -1.18
CSDE1-213ENST00000530784 TTLL2Q9BWV7 592 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 CRNKL1Q9BZJ0 848 aaKnown RBP7.65□□□□□ -1.18
CSDE1-213ENST00000530784 RPAP3Q9H6T3 665 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-213ENST00000530784 KCNK9Q9NPC2 374 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 TMEM45AQ9NWC5 275 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 CACNA1IQ9P0X4 2223 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 B3GNT3Q9Y2A9 372 aa7.65□□□□□ -1.18
CSDE1-213ENST00000530784 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-213ENST00000530784 CDK5RAP2Q96SN8 1893 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 MPHOSPH10O00566 681 aaKnown RBP7.64□□□□□ -1.19
CSDE1-213ENST00000530784 ENO1P06733 434 aaKnown RBP7.64□□□□□ -1.19
CSDE1-213ENST00000530784 HOXC6P09630 235 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 SERPINB3P29508 390 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 TECP42680 631 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 SLC12A2P55011 1212 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 GRB14Q14449 540 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 LRRC26Q2I0M4 334 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 LRIT3Q3SXY7 679 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 SYCP2LQ5T4T6 812 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 SLC9C2Q5TAH2 1124 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 DHRS13Q6UX07 377 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 ZNF793Q6ZN11 406 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 FAM57BQ71RH2 274 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 IRF2BP2Q7Z5L9 587 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 RHPN2Q8IUC4 686 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 TMEM41AQ96HV5 264 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 GPR78Q96P69 363 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 PRPF18Q99633 342 aaKnown RBP7.64□□□□□ -1.19
CSDE1-213ENST00000530784 TRIM2Q9C040 744 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 FOXP1Q9H334 677 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-213ENST00000530784 MOV10Q9HCE1 1003 aaKnown RBP7.64□□□□□ -1.19
CSDE1-213ENST00000530784 IL1RAPL2Q9NP60 686 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 ARFGAP3Q9NP61 516 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 MCM9Q9NXL9 1143 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 RANBP2P49792 3224 aaKnown RBP7.64□□□□□ -1.19
CSDE1-213ENST00000530784 ALPK3Q96L96 1907 aa7.64□□□□□ -1.19
CSDE1-213ENST00000530784 ZNF532Q9HCE3 1301 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 M0QYT0 321 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 USP12O75317 370 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 KAT7O95251 611 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 TMEM191BP0C7N4 346 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 ALDH18A1P54886 795 aaKnown RBP7.63□□□□□ -1.19
CSDE1-213ENST00000530784 GABPAQ06546 454 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 SRSF1Q07955 248 aaKnown RBP eCLIP7.63□□□□□ -1.19
CSDE1-213ENST00000530784 STARD3Q14849 445 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 AWAT2Q6E213 333 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 TMEM179Q6ZVK1 233 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 DEFB123Q8N688 67 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 SDR42E1Q8WUS8 393 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 ZFYVE19Q96K21 471 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 NAV1Q8NEY1 1877 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 TRIOBPQ9H2D6 2365 aa7.63□□□□□ -1.19
CSDE1-213ENST00000530784 A0A1W2PRG0 241 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 AQP12BA6NM10 295 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 DNM1LO00429 736 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 HMMRO75330 724 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 RFPL3SP0C7P2 107 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 TFEBP19484 476 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 COG2Q14746 738 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 AAK1Q2M2I8 961 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 GLE1Q53GS7 698 aaKnown RBP7.62□□□□□ -1.19
CSDE1-213ENST00000530784 Q7L0L9 218 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 SLC44A5Q8NCS7 719 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 ZNF548Q8NEK5 533 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-213ENST00000530784 LPAR1Q92633 364 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 KIF1BPQ96EK5 621 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 FAR2Q96K12 515 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 LBHD1Q9BQE6 289 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-213ENST00000530784 MOV10L1Q9BXT6 1211 aaKnown RBP7.62□□□□□ -1.19
CSDE1-213ENST00000530784 SPATC1LQ9H0A9 340 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms