RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 MRGPRX3Q96LB0 322 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 AGAP3Q96P47 875 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 OMDQ99983 421 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SEMA3CQ99985 751 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 TMEM121Q9BTD3 319 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 C1QTNF7Q9BXJ2 289 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 AP1M1Q9BXS5 423 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 MAGEB5Q9BZ81 275 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 KCNH6Q9H252 994 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 TRABDQ9H4I3 376 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 GLOD4Q9HC38 313 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 NT5MQ9NPB1 228 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 EIF2B3Q9NR50 452 aaKnown RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SPATA6Q9NWH7 488 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SAE1Q9UBE0 346 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SLCO3A1Q9UIG8 710 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 PHTF1Q9UMS5 762 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SPTBN5Q9NRC6 3674 aaKnown RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 LRRC72A6NJI9 287 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 TTC34A8MYJ7 566 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ZNF185O15231 689 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 BNIP3LO60238 219 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 IL1BP01584 269 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 KRT14P02533 472 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FGF1P05230 155 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ITIH2P19823 946 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 HLA-DPA1P20036 260 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 CD72P21854 359 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ADCY8P40145 1251 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 CTSOP43234 321 aaPredicted RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 NEK3P51956 506 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ADCY2Q08462 1091 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 SNX1Q13596 522 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 PTK6Q13882 451 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 LLGL1Q15334 1064 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 CYTH1Q15438 398 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 USP39Q53GS9 565 aaKnown RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 SPDYCQ5MJ68 293 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ARTNQ5T4W7 220 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 C9orf64Q5T6V5 341 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 AADACL2Q6P093 401 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FBXL19Q6PCT2 694 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 GDPD4Q6W3E5 623 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 DPY19L3Q6ZPD9 716 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 Q6ZVU0 165 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 USP45Q70EL2 814 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 NLRP9Q7RTR0 991 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 HOOK3Q86VS8 718 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 TMPRSS6Q8IU80 811 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ZNF567Q8N184 647 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ZNF687Q8N1G0 1237 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 PRELID2Q8N945 189 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 OR52K2Q8NGK3 314 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 OR2A12Q8NGT7 310 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FAM174AQ8TBP5 190 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 GANCQ8TET4 914 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FRS2Q8WU20 508 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 PTPRN2Q92932 1015 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 IMP4Q96G21 291 aaKnown RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 MS4A14Q96JA4 679 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FEM1CQ96JP0 617 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 NECAB3Q96P71 396 aaPredicted RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 C19orf43Q9BQ61 176 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 HDAC8Q9BY41 377 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FOXP3Q9BZS1 431 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 TM6SF2Q9BZW4 377 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 CDH19Q9H159 772 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 SUV39H2Q9H5I1 410 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ZDHHC6Q9H6R6 413 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 USP29Q9HBJ7 922 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 SGK2Q9HBY8 427 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FBRSL1Q9HCM7 1045 aaKnown RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 CD320Q9NPF0 282 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 PRSS16Q9NQE7 514 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 CACNA2D2Q9NY47 1150 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ASIC3Q9UHC3 531 aa8.02□□□□□ -1.13
SSBP3-211ENST00000528787 FCF1Q9Y324 198 aaKnown RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 MUC22E2RYF6 1773 aaPredicted RBP8.02□□□□□ -1.13
SSBP3-211ENST00000528787 ATG2BQ96BY7 2078 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TCRBV21S2A2A0A5A6 115 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 H0Y858 1186 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 KPNA3O00505 521 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 NEMP1O14524 444 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TRIM24O15164 1050 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TSPAN6O43657 245 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 AP1G1O43747 822 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 SIN3BO75182 1162 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 PPFIA2O75334 1257 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 NDST3O95803 873 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 PEX11BO96011 259 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 MT-CO1P00395 513 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 HLA-DQB2P05538 268 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 PYGLP06737 847 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 ZNF30P17039 623 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 CR2P20023 1033 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TPSB2P20231 275 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 GLDCP23378 1020 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms