RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	MYO1F	O00160	1098 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	DFFA	O00273	331 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	FLRT2	O43155	660 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	TOP3B	O95985	862 aa	Known RBP	11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	ARL4A	P40617	200 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	ADK	P55263	362 aa	Known RBP	11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	OVGP1	Q12889	678 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	FOXC1	Q12948	553 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	TBX2	Q13207	712 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	TRIP6	Q15654	476 aa	Known RBP	11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	SLC45A4	Q5BKX6	768 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	SARM1	Q6SZW1	724 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	GDPD4	Q6W3E5	623 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	IQCH	Q86VS3	1027 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	SETD7	Q8WTS6	366 aa	Known RBP	11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	TSC1	Q92574	1164 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	KLHL32	Q96NJ5	620 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	CHP1	Q99653	195 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	DEF6	Q9H4E7	631 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	PCDH18	Q9HCL0	1135 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	GDF3	Q9NR23	364 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	ETNK2	Q9NVF9	386 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	CTTNBP2NL	Q9P2B4	639 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	UVRAG	Q9P2Y5	699 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	GGT7	Q9UJ14	662 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	CEP295	Q9C0D2	2601 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	CACNA1B	Q00975	2339 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	KNL1	Q8NG31	2342 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362	FRY	Q5TBA9	3013 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	AREL1	O15033	823 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	DFNA5	O60443	496 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	PROSC	O94903	275 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	PIGN	O95427	931 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	TPM1	P09493	284 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	H2AFZ	P0C0S5	128 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	TMEM253	P0C7T8	217 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	SPINK2	P20155	84 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	HNRNPA2B1	P22626	353 aa	Known RBP	11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	AMPD1	P23109	780 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	AKT2	P31751	481 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	RGR	P47804	291 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	RPS21	P63220	83 aa	Known RBP	11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	STAT4	Q14765	748 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	LRRC73	Q5JTD7	316 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	KIAA1161	Q6NSJ0	714 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	TMCO3	Q6UWJ1	677 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	GCNT7	Q6ZNI0	430 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	H2AFV	Q71UI9	128 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	ABI3BP	Q7Z7G0	1075 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	GLRX5	Q86SX6	157 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	LZTR1	Q8N653	840 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	TSEN2	Q8NCE0	465 aa	Known RBP	11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	RAB7B	Q96AH8	199 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	FEM1C	Q96JP0	617 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	CPEB1	Q9BZB8	566 aa	Known RBP	11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	ERVMER34-1	Q9H9K5	563 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	SPTLC3	Q9NUV7	552 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	DKK3	Q9UBP4	350 aa		11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	IPO11	Q9UI26	975 aa	Known RBP	11.91	□□□□□ -0.5
PSMC3-205	ENST00000528362	DOCK4	Q8N1I0	1966 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	IGLON5	A6NGN9	336 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	MUSK	O15146	869 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	RAD51B	O15315	384 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	TSPAN6	O43657	245 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	AKR1B10	O60218	316 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	BUB1B	O60566	1050 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	PALM	O75781	387 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	PEX11B	O96011	259 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	CD48	P09326	243 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	FTH1P19	P0C7X4	201 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	TIMP2	P16035	220 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	IL4R	P24394	825 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	EPHA8	P29322	1005 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	GRK6	P43250	576 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	SSR1	P43307	286 aa	Known RBP	11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	ARSE	P51690	589 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	CDH6	P55285	790 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	CLDN2	P57739	230 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	RAD51	Q06609	339 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	IL10RB	Q08334	325 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	MMRN1	Q13201	1228 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	SUZ12	Q15022	739 aa	Known RBP	11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	HADH	Q16836	314 aa	Known RBP	11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	TSR1	Q2NL82	804 aa	Known RBP	11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	GATAD2A	Q86YP4	633 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	CNGA4	Q8IV77	575 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	OR13H1	Q8NG92	308 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	FAM71B	Q8TC56	605 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	RHBDD1	Q8TEB9	315 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	SAP25	Q8TEE9	199 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	C1QTNF2	Q9BXJ5	285 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	SP110	Q9HB58	689 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	PCDHB9	Q9Y5E1	797 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	CHD8	Q9HCK8	2581 aa		11.9	□□□□□ -0.5
PSMC3-205	ENST00000528362	CEP192	Q8TEP8	1941 aa		11.9	□□□□□ -0.51
PSMC3-205	ENST00000528362	TSPAN11	A1L157	253 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms