RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 HAX1O00165 279 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 WNT9AO14904 365 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 YKT6O15498 198 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 FLRT2O43155 660 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 PROSCO94903 275 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 TCF4P15884 667 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 CCT8P50990 548 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 SUOXP51687 545 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 RPS21P63220 83 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 SHC2P98077 582 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 IL10RBQ08334 325 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 SMTNL2Q2TAL5 461 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 TMEM259Q4ZIN3 620 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 ATXN7L2Q5T6C5 722 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 TMCO4Q5TGY1 634 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 TMCO3Q6UWJ1 677 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 LAYNQ6UX15 382 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 PARS2Q7L3T8 475 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 GLRX5Q86SX6 157 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 NAXDQ8IW45 347 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 OXR1Q8N573 874 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 NPWQ8N729 165 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 TMEM145Q8NBT3 493 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 ASB12Q8WXK4 309 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 HSPH1Q92598 858 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 KLHL32Q96NJ5 620 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 ELF4Q99607 663 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 NHEJ1Q9H9Q4 299 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 GDF3Q9NR23 364 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 LHX3Q9UBR4 397 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 PCDHB9Q9Y5E1 797 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 HS3ST3A1Q9Y663 406 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 SPTBN2O15020 2390 aa12.28□□□□□ -0.44
TRAPPC4-209ENST00000528230 DFFAO00273 331 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 KCNK3O14649 394 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 AREL1O15033 823 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 SLC31A1O15431 190 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 CBFA2T3O75081 653 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 PALMO75781 387 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 UGT2B4P06133 528 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 HNRNPA2B1P22626 353 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 AMPD1P23109 780 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 AKT2P31751 481 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 GKP32189 559 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 MAN1A1P33908 653 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 RXRGP48443 463 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 NXPH1P58417 271 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 TRIP6Q15654 476 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 TXNRD3NBQ6F5E7 133 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 TTC7BQ86TV6 843 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 LRRC49Q8IUZ0 686 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 OR6K2Q8NGY2 324 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 SETD7Q8WTS6 366 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 TSC1Q92574 1164 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 KLHDC7BQ96G42 594 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZNF641Q96N77 438 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZNF599Q96NL3 588 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 LENG8Q96PV6 779 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 CSPG4P5Q96PW8 444 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 TUBGCP5Q96RT8 1024 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 CDC6Q99741 560 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 PACSIN1Q9BY11 444 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 SLC17A9Q9BYT1 436 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 SP110Q9HB58 689 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 PCDH18Q9HCL0 1135 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 IPO11Q9UI26 975 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 INTUQ9ULD6 942 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZFR2Q9UPR6 939 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 SHROOM3Q8TF72 1996 aa12.27□□□□□ -0.45
TRAPPC4-209ENST00000528230 MTA2O94776 668 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 TRIM16O95361 564 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 KRT7P08729 469 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 IL4RP24394 825 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 SERPINB6P35237 376 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 ARHGAP25P42331 645 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 ABL2P42684 1182 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 ARRB1P49407 418 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 RENBPP51606 427 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 ARSEP51690 589 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 CDH6P55285 790 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 SIM1P81133 766 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 KRT81Q14533 505 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 PDK2Q15119 407 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 TCEAL1Q15170 157 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 INAVAQ3KP66 663 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 SEL1L3Q68CR1 1132 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 SRLQ86TD4 932 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 DCP2Q8IU60 420 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 MAP7D3Q8IWC1 876 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 RHOT2Q8IXI1 618 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 BAHD1Q8TBE0 780 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 RHBDD1Q8TEB9 315 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 CAMK1GQ96NX5 476 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 C1QTNF2Q9BXJ5 285 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 SUV39H2Q9H5I1 410 aa12.26□□□□□ -0.45
TRAPPC4-209ENST00000528230 ANGPTL2Q9UKU9 493 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms