RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 PCOLCE2Q9UKZ9 415 aa17.25■□□□□ 0.35
CCS-203ENST00000526058 BTBD3Q9Y2F9 522 aa17.25■□□□□ 0.35
CCS-203ENST00000526058 PCDHB9Q9Y5E1 797 aa17.25■□□□□ 0.35
CCS-203ENST00000526058 PCDHGB2Q9Y5G2 931 aa17.25■□□□□ 0.35
CCS-203ENST00000526058 MAP1BP46821 2468 aaKnown RBP17.24■□□□□ 0.35
CCS-203ENST00000526058 ANKRD36A6QL64 1941 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 A0A1B0GTQ1 180 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 PRAMEF26H0Y7S4 382 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 MFAP3LO75121 409 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 CCT8P50990 548 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 ZNF135P52742 658 aaPredicted RBP17.24■□□□□ 0.35
CCS-203ENST00000526058 HNRNPDQ14103 355 aaKnown RBP17.24■□□□□ 0.35
CCS-203ENST00000526058 STAT4Q14765 748 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 SUZ12Q15022 739 aaKnown RBP17.24■□□□□ 0.35
CCS-203ENST00000526058 SHBQ15464 509 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 TMEM259Q4ZIN3 620 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 GDPD4Q6W3E5 623 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 SPATS2Q86XZ4 545 aaKnown RBP17.24■□□□□ 0.35
CCS-203ENST00000526058 MFSD2AQ8NA29 543 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 TMEM145Q8NBT3 493 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 RHBDD1Q8TEB9 315 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 ELF4Q99607 663 aaPredicted RBP17.24■□□□□ 0.35
CCS-203ENST00000526058 OSBPL1AQ9BXW6 950 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 DEF6Q9H4E7 631 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 PCDH18Q9HCL0 1135 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 GDF3Q9NR23 364 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 ZNHIT6Q9NWK9 470 aaKnown RBP17.24■□□□□ 0.35
CCS-203ENST00000526058 ANGPTL2Q9UKU9 493 aa17.24■□□□□ 0.35
CCS-203ENST00000526058 SSU72P8A0A1W2PR75 194 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 H3BRJ5 948 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 FLRT2O43155 660 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 SPINT1O43278 529 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 AKR1B10O60218 316 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 TPM1P09493 284 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 SPINK2P20155 84 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 ARL4AP40617 200 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 SSR1P43307 286 aaKnown RBP17.23■□□□□ 0.35
CCS-203ENST00000526058 FGL2Q14314 439 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
CCS-203ENST00000526058 LRRC73Q5JTD7 316 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 BAHD1Q8TBE0 780 aaPredicted RBP17.23■□□□□ 0.35
CCS-203ENST00000526058 TEKT4Q8WW24 435 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
CCS-203ENST00000526058 CNTNAP3BQ96NU0 1288 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 CSPG4P5Q96PW8 444 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 SLC17A9Q9BYT1 436 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 CNTNAP3Q9BZ76 1288 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 WASF3Q9UPY6 502 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 ITM2BQ9Y287 266 aa17.23■□□□□ 0.35
CCS-203ENST00000526058 SHROOM3Q8TF72 1996 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 TDRD6O60522 2096 aaKnown RBP17.22■□□□□ 0.35
CCS-203ENST00000526058 WDFY3Q8IZQ1 3526 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 AP1G1O43747 822 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 PCDHGA12O60330 932 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 DFNA5O60443 496 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 PALMO75781 387 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 PIGNO95427 931 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 H2AFZP0C0S5 128 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 ITIH2P19823 946 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 IL4RP24394 825 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 RGRP47804 291 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 CLDN2P57739 230 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 RPS21P63220 83 aaKnown RBP17.22■□□□□ 0.35
CCS-203ENST00000526058 SHC2P98077 582 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 RAD51Q06609 339 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 TBX2Q13207 712 aaPredicted RBP17.22■□□□□ 0.35
CCS-203ENST00000526058 ATP13A4Q4VNC1 1196 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 KIAA1161Q6NSJ0 714 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 SARM1Q6SZW1 724 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 H2AFVQ71UI9 128 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 IQCHQ86VS3 1027 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 GATAD2AQ86YP4 633 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 TSC1Q92574 1164 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 RAB7BQ96AH8 199 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 FEM1CQ96JP0 617 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 CPEB1Q9BZB8 566 aaKnown RBP17.22■□□□□ 0.35
CCS-203ENST00000526058 NHEJ1Q9H9Q4 299 aaPredicted RBP17.22■□□□□ 0.35
CCS-203ENST00000526058 SP110Q9HB58 689 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 SPTLC3Q9NUV7 552 aa17.22■□□□□ 0.35
CCS-203ENST00000526058 IPO11Q9UI26 975 aaKnown RBP17.22■□□□□ 0.35
CCS-203ENST00000526058 IGLON5A6NGN9 336 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 TSPAN6O43657 245 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 BUB1BO60566 1050 aaPredicted RBP17.21■□□□□ 0.35
CCS-203ENST00000526058 PROSCO94903 275 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 PAK4O96013 591 aaPredicted RBP17.21■□□□□ 0.35
CCS-203ENST00000526058 CD48P09326 243 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 THEGLP0DJG4 465 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 TIMP2P16035 220 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 HNRNPA2B1P22626 353 aaKnown RBP17.21■□□□□ 0.35
CCS-203ENST00000526058 AKT2P31751 481 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 CDH6P55285 790 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 IL10RBQ08334 325 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 OVGP1Q12889 678 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 BNIP3Q12983 259 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 MMRN1Q13201 1228 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 KRT81Q14533 505 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 GCNT7Q6ZNI0 430 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 TTC7BQ86TV6 843 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 LZTR1Q8N653 840 aa17.21■□□□□ 0.35
CCS-203ENST00000526058 PNPLA1Q8N8W4 532 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms