RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PMS2P1A4D2B8 440 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 TPP1O14773 563 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 CASC3O15234 703 aaKnown RBP24.32■■□□□ 1.48
USP47-205ENST00000525257 GCATO75600 419 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 LSM8O95777 96 aaKnown RBP24.32■■□□□ 1.48
USP47-205ENST00000525257 ETFBP38117 255 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 THOP1P52888 689 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 VAC14Q08AM6 782 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 C1orf61Q13536 156 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 POLD3Q15054 466 aaPredicted RBP24.32■■□□□ 1.48
USP47-205ENST00000525257 CDO1Q16878 200 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 VWA3BQ502W6 1294 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 HSP90AA4PQ58FG1 418 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 PRRT3Q5FWE3 981 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 LRRC73Q5JTD7 316 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 NAA35Q5VZE5 725 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 PLPP6Q8IY26 295 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 ASB12Q8WXK4 309 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 ARHGEF2Q92974 986 aaKnown RBP24.32■■□□□ 1.48
USP47-205ENST00000525257 SLC46A1Q96NT5 459 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 SEMA4CQ9C0C4 833 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 OR12D3Q9UGF7 316 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 CHD5Q8TDI0 1954 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 KIF26BQ2KJY2 2108 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 COL6A6A6NMZ7 2263 aa24.32■■□□□ 1.48
USP47-205ENST00000525257 CAPN8A6NHC0 703 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 MMEP08473 750 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 IGFALSP35858 605 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 ADKP55263 362 aaKnown RBP24.31■■□□□ 1.48
USP47-205ENST00000525257 NOMO3P69849 1222 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 LY6DQ14210 128 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 MIIPQ5JXC2 388 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 VPS36Q86VN1 386 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 FAM114A1Q8IWE2 563 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 SLC35F3Q8IY50 421 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 PHACTR4Q8IZ21 702 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 OR2AP1Q8NGE2 309 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 TPCN2Q8NHX9 752 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 GLMNQ92990 594 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 GRAMD1AQ96CP6 724 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 WBP1Q96G27 269 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 PRR11Q96HE9 360 aaPredicted RBP24.31■■□□□ 1.48
USP47-205ENST00000525257 KLHL32Q96NJ5 620 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 LRRC61Q9BV99 259 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 BOCQ9BWV1 1114 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 SYNDIG1Q9H7V2 258 aa24.31■■□□□ 1.48
USP47-205ENST00000525257 PNMA8BQ9ULN7 279 aaPredicted RBP24.31■■□□□ 1.48
USP47-205ENST00000525257 J3QKU1 62 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 PES1O00541 588 aaKnown RBP24.3■■□□□ 1.48
USP47-205ENST00000525257 RIOK3O14730 519 aaKnown RBP24.3■■□□□ 1.48
USP47-205ENST00000525257 GSRP00390 522 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 MAPKAPK2P49137 400 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 RPIAP49247 311 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 GEMIN4P57678 1058 aaKnown RBP24.3■■□□□ 1.48
USP47-205ENST00000525257 SNRPD1P62314 119 aaKnown RBP24.3■■□□□ 1.48
USP47-205ENST00000525257 PTK2BQ14289 1009 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 C15orf59Q2T9L4 293 aaPredicted RBP24.3■■□□□ 1.48
USP47-205ENST00000525257 ATXN7L2Q5T6C5 722 aaPredicted RBP24.3■■□□□ 1.48
USP47-205ENST00000525257 MANEALQ5VSG8 457 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 KLHDC7AQ5VTJ3 777 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 NLRP14Q86W24 1093 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 MLKLQ8NB16 471 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 VOPP1Q96AW1 172 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 CENPTQ96BT3 561 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 ARHGEF26Q96DR7 871 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 TUBGCP2Q9BSJ2 902 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 HPCAL4Q9UM19 191 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 PCDHGA8Q9Y5G5 932 aa24.3■■□□□ 1.48
USP47-205ENST00000525257 PIEZO2Q9H5I5 2752 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 CXorf51AA0A1B0GTR3 108 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 FAM72CH0Y354 149 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 TCEA3O75764 348 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 ANXA6P08133 673 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 RHOQP17081 205 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 ADRA1BP35368 520 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 MYLK3Q32MK0 819 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 ARL13BQ3SXY8 428 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 C6orf132Q5T0Z8 1188 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 FAM72AQ5TYM5 149 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 FAM72DQ6L9T8 149 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 ARCQ7LC44 396 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 PHLDB2Q86SQ0 1253 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 FAM72BQ86X60 149 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 TTC9Q92623 222 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 NAA15Q9BXJ9 866 aaKnown RBP24.29■■□□□ 1.48
USP47-205ENST00000525257 OSBPL1AQ9BXW6 950 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 MAGEB5Q9BZ81 275 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 SLC13A1Q9BZW2 595 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 TMEM248Q9NWD8 314 aa24.29■■□□□ 1.48
USP47-205ENST00000525257 LMO7DNF2Z398 122 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 AREL1O15033 823 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 MMP20O60882 483 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 POP4O95707 220 aaKnown RBP24.28■■□□□ 1.48
USP47-205ENST00000525257 SKOR1P84550 965 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 NRG1Q02297 640 aaPredicted RBP24.28■■□□□ 1.48
USP47-205ENST00000525257 FAXCQ5TGI0 409 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 GDPD4Q6W3E5 623 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 TTC7BQ86TV6 843 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 EPS8L1Q8TE68 723 aa24.28■■□□□ 1.48
USP47-205ENST00000525257 SNRNP27Q8WVK2 155 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms