RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FEM1BQ9UK73 627 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 ISY1Q9ULR0 285 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 RABGAP1Q9Y3P9 1069 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CHD7Q9P2D1 2997 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 STK36Q9NRP7 1315 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 KIF28PB7ZC32 967 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 PRR23D1E9PI22 279 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 FOXN3O00409 490 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 ATP2A1O14983 1001 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 PRPF3O43395 683 aaKnown RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 SNX2O60749 519 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 EIF5BO60841 1220 aaKnown RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 ZBED4O75132 1171 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 USP12O75317 370 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 ICAM1P05362 532 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 PGK2P07205 417 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 CD63P08962 238 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 PRR23D2P0DMB1 279 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 RBL1P28749 1068 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 GJB2P29033 226 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 HOXA13P31271 388 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 JAK3P52333 1124 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 COPAP53621 1224 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 B4GALNT1Q00973 533 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 CNTN2Q02246 1040 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 SP3Q02447 781 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 MAP2K1Q02750 393 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 IKQ13123 557 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 STIM1Q13586 685 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 PKP1Q13835 747 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 ERV3-1Q14264 604 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 GRB14Q14449 540 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 POLD3Q15054 466 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 ANKRD1Q15327 319 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 CCL14Q16627 93 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 UBE2SQ16763 222 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 MINDY4Q4G0A6 757 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 C3orf38Q5JPI3 329 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 DAB2IPQ5VWQ8 1189 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 USP17L6PQ6QN14 398 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 COLCA1Q6ZS62 124 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 GPR142Q7Z601 462 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 MMP21Q8N119 569 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.29□□□□□ -1.883e-12■□□□□ 9.4
CSDE1-208ENST00000524652 SPATA3Q8NHX4 192 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 BCAS4Q8TDM0 211 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 WIPF2Q8TF74 440 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 CHURC1Q8WUH1 139 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 MSLNLQ96KJ4 702 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 SELENOOQ9BVL4 669 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 RNF26Q9BY78 433 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 NUAK2Q9H093 628 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 CHST8Q9H2A9 424 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 USP29Q9HBJ7 922 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 RNF146Q9NTX7 359 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 BARHL2Q9NY43 387 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 HOXC10Q9NYD6 342 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 VPS54Q9P1Q0 977 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 GJD2Q9UKL4 321 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 CCPG1Q9ULG6 757 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 CAPN11Q9UMQ6 739 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 KCNJ14Q9UNX9 436 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 SLC27A6Q9Y2P4 619 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 KMT2BQ9UMN6 2715 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 FASNP49327 2511 aaKnown RBP3.29□□□□□ -1.88
CSDE1-208ENST00000524652 SCN10AQ9Y5Y9 1956 aa3.29□□□□□ -1.88
CSDE1-208ENST00000524652 ABCB11O95342 1321 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 FRMPD4Q14CM0 1322 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 SCN5AQ14524 2016 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 SMAD6O43541 496 aaKnown RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 DHX16O60231 1041 aaKnown RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PRAMEF2O60811 474 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 DEXIO95424 95 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PLAUP00749 431 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 TMEM225BP0DP42 221 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 SCG2P13521 617 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 KIF5BP33176 963 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 DDIT3P35638 169 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PSMC4P43686 418 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 CPA2P48052 419 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 GNAQP50148 359 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 HSD17B4P51659 736 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 OAZ1P54368 228 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 RPS6P62753 249 aaKnown RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 UBXN2AP68543 259 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 IGBP1P78318 339 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 FMO1Q01740 532 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PRKCZQ05513 592 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 CCDC15Q0P6D6 951 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 BAATQ14032 418 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 KPNB1Q14974 876 aaKnown RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PPP2R5BQ15173 497 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 FAM102BQ5T8I3 360 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PLAG1Q6DJT9 500 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 SYNE3Q6ZMZ3 975 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 ZNF793Q6ZN11 406 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 C11orf44Q8N8P7 122 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms