RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 SEMA4AQ9H3S1 761 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 KLHL8Q9P2G9 620 aaPredicted RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 NCDNQ9UBB6 729 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 AMACRQ9UHK6 382 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 ATP8A1Q9Y2Q0 1164 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 NEU2Q9Y3R4 380 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 NYNRINQ9P2P1 1898 aaKnown RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 CKAP5Q14008 2032 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 FAM186AA6NE01 2351 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 GPR179Q6PRD1 2367 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 CHD5Q8TDI0 1954 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 CCDC163A0A0D9SF12 145 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 TTC24A2A3L6 582 aaPredicted RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 GCATO75600 419 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 GJB3O75712 270 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 NEBLO76041 1014 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 STK10O94804 968 aaKnown RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 ECEL1O95672 775 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 NDUFV2P19404 249 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 CNR2P34972 360 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 NNMTP40261 264 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 MAXP61244 160 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 RHOAP61586 193 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 LMNB2Q03252 620 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 ENPP2Q13822 863 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 TRIP13Q15645 432 aaPredicted RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 P3H1Q32P28 736 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 ACCSLQ4AC99 568 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 ANKRD20A2Q5SQ80 823 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 ATXN7L2Q5T6C5 722 aaPredicted RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 ANKRD20A1Q5TYW2 823 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 ANKRD20A3Q5VUR7 823 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 Q6ZVU0 165 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 PID1Q7Z2X4 250 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 METTL3Q86U44 580 aaKnown RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 KBTBD6Q86V97 674 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 MMGT1Q8N4V1 131 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 FAM160A2Q8N612 972 aaPredicted RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 PCDH20Q8N6Y1 951 aaKnown RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 FRMD1Q8N878 549 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 CCDC89Q8N998 374 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 NOA1Q8NC60 698 aaKnown RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 GRK7Q8WTQ7 553 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 SLCO2A1Q92959 643 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 ISG20Q96AZ6 181 aaKnown RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 EXOC2Q96KP1 924 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 RUNDC3BQ96NL0 473 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 PSKH2Q96QS6 385 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 MGME1Q9BQP7 344 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 TM6SF2Q9BZW4 377 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 GLOD4Q9HC38 313 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 SUN2Q9UH99 717 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 FEZ2Q9UHY8 353 aaPredicted RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 GMEB2Q9UKD1 530 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 TRHDEQ9UKU6 1024 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 CYP8B1Q9UNU6 501 aa12.09□□□□□ -0.47
PVT1-215ENST00000522963 EP300Q09472 2414 aaPredicted RBP12.09□□□□□ -0.47
PVT1-215ENST00000522963 WDFY4Q6ZS81 3184 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 NUP205Q92621 2012 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 F5H423 210 aaPredicted RBP12.08□□□□□ -0.48
PVT1-215ENST00000522963 TTI1O43156 1089 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 RAD51CO43502 376 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 BNIP3LO60238 219 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 OPHN1O60890 802 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 GSRP00390 522 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 KRT14P02533 472 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 CR2P20023 1033 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 BCKDHBP21953 392 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 RPL22P35268 128 aaKnown RBP12.08□□□□□ -0.48
PVT1-215ENST00000522963 DR1Q01658 176 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 DSC2Q02487 901 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 ITKQ08881 620 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 NIPAL4Q0D2K0 466 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 DHX34Q14147 1143 aaKnown RBP12.08□□□□□ -0.48
PVT1-215ENST00000522963 HNRNPA1L2Q32P51 320 aaKnown RBP12.08□□□□□ -0.48
PVT1-215ENST00000522963 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 JAMLQ86YT9 394 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 TMPRSS6Q8IU80 811 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 DCLK2Q8N568 766 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
PVT1-215ENST00000522963 DEFB119Q8N690 84 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 SUMF1Q8NBK3 374 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 PTPRN2Q92932 1015 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 SIPA1Q96FS4 1042 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 SPACA7Q96KW9 195 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 MRGPRX1Q96LB2 322 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 NSMCE3Q96MG7 304 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 PCDH9Q9HC56 1237 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 TTLL3Q9Y4R7 772 aa12.08□□□□□ -0.48
PVT1-215ENST00000522963 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 EDDM13A0A1B0GTR0 161 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 INSIG1O15503 277 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 SIN3BO75182 1162 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 METTL18O95568 372 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 GAS8O95995 478 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms