RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TTYH3Q9C0H2 523 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 DHX35Q9H5Z1 703 aaKnown RBP21■□□□□ 0.95
SDCBP-209ENST00000522243 AIPL1Q9NZN9 384 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 DDX3XO00571 662 aaKnown RBP eCLIP20.99■□□□□ 0.954e-16■□□□□ 11.2
SDCBP-209ENST00000522243 INSIG1O15503 277 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 FFAR2O15552 330 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 SPINT1O43278 529 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 TSPAN6O43657 245 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 SIGLEC6O43699 453 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 ITIH2P19823 946 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 KLHL30Q0D2K2 578 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 SGCGQ13326 291 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 CAMK2BQ13554 666 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 NR1I3Q14994 352 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 CYTH1Q15438 398 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 PARP15Q460N3 678 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 TTC7BQ86TV6 843 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 UMODL1-AS1Q8N2C9 162 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 CASKIN2Q8WXE0 1202 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 RAB7BQ96AH8 199 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 SNRNP25Q9BV90 132 aaKnown RBP20.99■□□□□ 0.95
SDCBP-209ENST00000522243 OSBPL1AQ9BXW6 950 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 MYO1AQ9UBC5 1043 aa20.99■□□□□ 0.95
SDCBP-209ENST00000522243 CNOT8Q9UFF9 292 aaKnown RBP20.99■□□□□ 0.95
SDCBP-209ENST00000522243 ARID1BQ8NFD5 2236 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 IGF2RP11717 2491 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 SYCE3A1L190 88 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 TMEM191CA6NGB0 347 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 EEF2KO00418 725 aaKnown RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 FGF10O15520 208 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 PIAS2O75928 621 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 C1SP09871 688 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 JUPP14923 745 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 CKMT2P17540 419 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 PRKCIP41743 596 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 RAD51Q06609 339 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 CYP4F3Q08477 520 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 INO80DQ53TQ3 878 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 ERMARDQ5T6L9 678 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 KYAT3Q6YP21 454 aaKnown RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 TMPRSS12Q86WS5 348 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 ZNF653Q96CK0 615 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 KCTD15Q96SI1 283 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 KLF6Q99612 283 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 C1QTNF2Q9BXJ5 285 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 DNAJC28Q9NX36 388 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 LHX3Q9UBR4 397 aa20.98■□□□□ 0.95
SDCBP-209ENST00000522243 UBA2Q9UBT2 640 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-209ENST00000522243 GOLGA4Q13439 2230 aaKnown RBP20.97■□□□□ 0.95
SDCBP-209ENST00000522243 SPEGQ15772 3267 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 J3KR12 359 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 FPGTO14772 594 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 GZMAP12544 262 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 PROX2Q3B8N5 592 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 HES3Q5TGS1 186 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 FAM174AQ8TBP5 190 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 SLC39A8Q9C0K1 460 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 LRRC19Q9H756 370 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 CBX8Q9HC52 389 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 IPO11Q9UI26 975 aaKnown RBP20.97■□□□□ 0.95
SDCBP-209ENST00000522243 MYLKQ15746 1914 aa20.97■□□□□ 0.95
SDCBP-209ENST00000522243 AREL1O15033 823 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 DAPK3O43293 454 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 MMP20O60882 483 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 RNF8O76064 485 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 PIGNO95427 931 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 TIMP2P16035 220 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 MIPP30301 263 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 DAB2P98082 770 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 ZNF211Q13398 564 aaPredicted RBP20.96■□□□□ 0.95
SDCBP-209ENST00000522243 PDE1CQ14123 709 aaPredicted RBP20.96■□□□□ 0.95
SDCBP-209ENST00000522243 FZD2Q14332 565 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 TPRG1LQ5T0D9 272 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 LUZP1Q86V48 1076 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 ARHGEF26Q96DR7 871 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 NCAPGQ9BPX3 1015 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 PDFQ9HBH1 243 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 GPR27Q9NS67 375 aa20.96■□□□□ 0.95
SDCBP-209ENST00000522243 PRPSAP2O60256 369 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 GIMD1P0DJR0 217 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 CDK4P11802 303 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 MYF5P13349 255 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 HTR7P34969 479 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 HNF1BP35680 557 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 RABIFP47224 123 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 PAPOLAP51003 745 aaKnown RBP20.95■□□□□ 0.94
SDCBP-209ENST00000522243 NDST2P52849 883 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 HS1BP3Q53T59 392 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 PPP6R3Q5H9R7 873 aaPredicted RBP20.95■□□□□ 0.94
SDCBP-209ENST00000522243 C19orf48Q6RUI8 117 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 VPS36Q86VN1 386 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 ZSCAN30Q86W11 494 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 DCP2Q8IU60 420 aaKnown RBP20.95■□□□□ 0.94
SDCBP-209ENST00000522243 PDCD7Q8N8D1 485 aaKnown RBP20.95■□□□□ 0.94
SDCBP-209ENST00000522243 OR4C6Q8NH72 309 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 CXorf40AQ8TE69 158 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 LENG8Q96PV6 779 aaPredicted RBP20.95■□□□□ 0.94
SDCBP-209ENST00000522243 WRAP53Q9BUR4 548 aaKnown RBP20.95■□□□□ 0.94
SDCBP-209ENST00000522243 EDEM3Q9BZQ6 932 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 RAXQ9Y2V3 346 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms