RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 RAD51BO15315 384 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 AP1G1O43747 822 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 PRPSAP2O60256 369 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 PIAS2O75928 621 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 PIGNO95427 931 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 C1SP09871 688 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 RABIFP47224 123 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 YBEYP58557 167 aaPredicted RBP16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 HNRNPKP61978 463 aaKnown RBP eCLIP16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 OGDHQ02218 1023 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 TARDBPQ13148 414 aaKnown RBP eCLIP16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 FGL2Q14314 439 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 PARGQ86W56 976 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 DCP2Q8IU60 420 aaKnown RBP16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 SLC22A18ASQ8N1D0 253 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 FAM174AQ8TBP5 190 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 CASKIN2Q8WXE0 1202 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 BPIFA3Q9BQP9 254 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 C1QTNF7Q9BXJ2 289 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 KLC2Q9H0B6 622 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 CAAP1Q9H8G2 361 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 SP110Q9HB58 689 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 DONSONQ9NYP3 566 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 HS3ST3A1Q9Y663 406 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 PTPRBP23467 1997 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 ARHGAP42A6NI28 874 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 MMP20O60882 483 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 NEBLO76041 1014 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 TM7SF2O76062 418 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 SKILP12757 684 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 MYF5P13349 255 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 SEMG2Q02383 582 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 ZNF211Q13398 564 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 MAMLD1Q13495 774 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 SERINC3Q13530 473 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 COL28A1Q2UY09 1125 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 PPP1R15BQ5SWA1 713 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 KDM7AQ6ZMT4 941 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 KANSL1Q7Z3B3 1105 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 ABI3BPQ7Z7G0 1075 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 ZSCAN30Q86W11 494 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 PLPP6Q8IY26 295 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 SLC25A45Q8N413 288 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 OR4C6Q8NH72 309 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 LMX1AQ8TE12 382 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 BAP1Q92560 729 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 BMFQ96LC9 184 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 SNRNP25Q9BV90 132 aaKnown RBP16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 NOL6Q9H6R4 1146 aaKnown RBP16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 SCINQ9Y6U3 715 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 USP24Q9UPU5 2620 aa16.35■□□□□ 0.21
IGHV3-42-201ENST00000520410 CXorf51AA0A1B0GTR3 108 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 TCRBV5S1A1TA0A578 114 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 INSIG1O15503 277 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 FTLP02792 175 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 JUNDP17535 347 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 ITIH2P19823 946 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 ILKQ13418 452 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 CA9Q16790 459 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 PROX2Q3B8N5 592 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 ERMARDQ5T6L9 678 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 ZNF571Q7Z3V5 609 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 TRIM11Q96F44 468 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 VCPIP1Q96JH7 1222 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 CINPQ9BW66 212 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 ABCG4Q9H172 646 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 SYNDIG1Q9H7V2 258 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 CLCA2Q9UQC9 943 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 COQ6Q9Y2Z9 468 aa16.34■□□□□ 0.21
IGHV3-42-201ENST00000520410 SYCE3A1L190 88 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 GOLGA6L19H0YKK7 550 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 J3KR12 359 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 PALMO75781 387 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 ACP1P24666 158 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 SSR1P43307 286 aaKnown RBP16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 PAPOLAP51003 745 aaKnown RBP16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 DUSP3P51452 185 aaPredicted RBP16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 ELP6Q0PNE2 266 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 PTK2BQ14289 1009 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 FZD2Q14332 565 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 TCEA2Q15560 299 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 KLHL40Q2TBA0 621 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 DEFB133Q30KQ1 61 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 INO80DQ53TQ3 878 aaPredicted RBP16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 ERAP2Q6P179 960 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 UMODL1-AS1Q8N2C9 162 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 DENND6BQ8NEG7 585 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 TSC1Q92574 1164 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 HSPH1Q92598 858 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 APOLD1Q96LR9 279 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 NAP1L5Q96NT1 182 aaPredicted RBP16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 KCTD15Q96SI1 283 aaPredicted RBP16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 IL12RB2Q99665 862 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 DUSP23Q9BVJ7 150 aa16.33■□□□□ 0.2
IGHV3-42-201ENST00000520410 C1QTNF2Q9BXJ5 285 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms