RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 FAM170BA6NMN3 283 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GOLGA6L19H0YKK7 550 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 APOL1O14791 398 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 WNT9AO14904 365 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 NPC1O15118 1278 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ARHGAP6O43182 974 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MBTPS2O43462 519 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TACC1O75410 805 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FSBPO95073 299 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 RTN3O95197 1032 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 ASS1P00966 412 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 HNRNPA1P09651 372 aaKnown RBP eCLIP2.86□□□□□ -1.95
SKP1-204ENST00000517691 MYL4P12829 197 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KRT5P13647 590 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 JUPP14923 745 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PORP16435 677 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 SLC9A1P19634 815 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CYP2F1P24903 491 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 EEF1GP26641 437 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 USP8P40818 1118 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 HADHAP40939 763 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MTHFRP42898 656 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TUFMP49411 452 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 NDST1P52848 882 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MFAP3P55082 362 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 POLR2FP61218 127 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 YWHAEP62258 255 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 SMARCB1Q12824 385 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GPR17Q13304 367 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SMAD4Q13485 552 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 CUL2Q13617 745 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KCNC3Q14003 757 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SEMA3AQ14563 771 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 VEPH1Q14D04 833 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 POLD3Q15054 466 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 PPA1Q15181 289 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 RASA2Q15283 850 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TSTQ16762 297 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 EXOC3L4Q17RC7 722 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 NKPD1Q17RQ9 610 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GAB4Q2WGN9 574 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TTC31Q49AM3 519 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 VWA3BQ502W6 1294 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SETMARQ53H47 684 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 TOR2AQ5JU69 321 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CYP4A22Q5TCH4 519 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SDHAF4Q5VUM1 108 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 E4F1Q66K89 784 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 LIN54Q6MZP7 749 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ALKBH5Q6P6C2 394 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 SLC22A25Q6T423 547 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TMEM184AQ6ZMB5 413 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ZNF765Q7L2R6 523 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 OVCH1Q7RTY7 1134 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GRASPQ7Z6J2 395 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 ACOT1Q86TX2 421 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 OSTM1Q86WC4 334 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 IRF2BP1Q8IU81 584 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MFSD4AQ8N468 514 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TTC9BQ8N6N2 239 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 AVL9Q8NBF6 648 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 B3GALNT2Q8NCR0 500 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SMRP1Q8NCR6 262 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ZMIZ2Q8NF64 920 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GIMAP7Q8NHV1 300 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PPP1R14CQ8TAE6 165 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FEZF2Q8TBJ5 459 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KBTBD7Q8WVZ9 684 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TRIM44Q96DX7 344 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 APIPQ96GX9 242 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MSLNLQ96KJ4 702 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 RTP3Q9BQQ7 232 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SYT15Q9BQS2 421 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PAIP1Q9H074 479 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 SDCBP2Q9H190 292 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 S1PR5Q9H228 398 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 NDST4Q9H3R1 872 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 DPEP3Q9H4B8 488 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 C7orf69Q9H7B7 122 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CYP3A43Q9HB55 503 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TRPV4Q9HBA0 871 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 APOBEC3GQ9HC16 384 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 XAB2Q9HCS7 855 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 PREBQ9HCU5 417 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 UBE2TQ9NPD8 197 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 KCND1Q9NSA2 647 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CISHQ9NSE2 258 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TMLHEQ9NVH6 421 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 HCFC1R1Q9NWW0 138 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ZDHHC7Q9NXF8 308 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TAB2Q9NYJ8 693 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GCNT4Q9P109 453 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 EPS15L1Q9UBC2 864 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CDH22Q9UJ99 828 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FBXL7Q9UJT9 491 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FBXW11Q9UKB1 542 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PCDHB4Q9Y5E5 795 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 INSL5Q9Y5Q6 135 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 XIRP2A4UGR9 3374 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TCHHQ07283 1943 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms