RNA–Protein interactions for RNA: ENST00000517684.2

RNF139-202, Transcript of ring finger protein 139, humanhuman

TSL 3

Gene RNF139, Length 467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-202ENST00000517684 SF3A3Q12874 501 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNF139-202ENST00000517684 ZNF169Q14929 603 aaPredicted RBP5.36□□□□□ -1.55
RNF139-202ENST00000517684 TRIM60Q495X7 471 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 DENND2CQ68D51 928 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 ANKRD40Q6AI12 368 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 LRRC31Q6UY01 552 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 C2CD5Q86YS7 1000 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 FAM71DQ8N9W8 422 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 NOA1Q8NC60 698 aaKnown RBP5.36□□□□□ -1.55
RNF139-202ENST00000517684 SPPL3Q8TCT6 385 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 AFAP1L1Q8TED9 768 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 REXO5Q96IC2 774 aaKnown RBP5.36□□□□□ -1.55
RNF139-202ENST00000517684 EPSTI1Q96J88 318 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 RPGRIP1Q96KN7 1286 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 SLF1Q9BQI6 1058 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 HAUS4Q9H6D7 363 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 SNX15Q9NRS6 342 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 LIN7CQ9NUP9 197 aaKnown RBP5.36□□□□□ -1.55
RNF139-202ENST00000517684 RMND1Q9NWS8 449 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 TAB2Q9NYJ8 693 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 FOXJ2Q9P0K8 574 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 FEM1BQ9UK73 627 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 NFU1Q9UMS0 254 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 C19orf53Q9UNZ5 99 aaPredicted RBP5.36□□□□□ -1.55
RNF139-202ENST00000517684 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.36□□□□□ -1.55
RNF139-202ENST00000517684 TOGARAM1Q9Y4F4 1720 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 NUP98P52948 1817 aa5.36□□□□□ -1.55
RNF139-202ENST00000517684 NHSL1Q5SYE7 1610 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 MROH5Q6ZUA9 1318 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 M0QYT0 321 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 M0QZQ0 153 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 PRKAB2O43741 272 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 SYF2O95926 243 aaKnown RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 MYCLP12524 364 aaPredicted RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 PEPDP12955 493 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 MMP8P22894 467 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 FPR3P25089 353 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 CASP1P29466 404 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 SERPINA4P29622 427 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 THBS4P35443 961 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 CCT6AP40227 531 aaKnown RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 CLK3P49761 638 aaKnown RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 RNASELQ05823 741 aaKnown RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 LMAN2Q12907 356 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 DNASE1L3Q13609 305 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 FAM153CQ494X1 144 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 TTC31Q49AM3 519 aaPredicted RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 ALFQ53S48 1182 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 TCP11X2Q5H9J9 407 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 FBXO47Q5MNV8 452 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 ZNF658Q5TYW1 1059 aaPredicted RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 PAPD7Q5XG87 772 aaKnown RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 NCAPH2Q6IBW4 605 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 ANKRD16Q6P6B7 361 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 KIRREL2Q6UWL6 708 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 RASAL3Q86YV0 1011 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 PNPLA1Q8N8W4 532 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 OR8K1Q8NGG5 319 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 NELFBQ8WX92 580 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 CPT1BQ92523 772 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 SLC9A6Q92581 669 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 PAAF1Q9BRP4 392 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 UBAC1Q9BSL1 405 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 CINPQ9BW66 212 aaPredicted RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 FAM107BQ9H098 131 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 CHODLQ9H9P2 273 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 RBM28Q9NW13 759 aaKnown RBP5.35□□□□□ -1.55
RNF139-202ENST00000517684 VPS54Q9P1Q0 977 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 KCND3Q9UK17 655 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 HPCAL4Q9UM19 191 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 INSL6Q9Y581 213 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 SLC4A4Q9Y6R1 1079 aa5.35□□□□□ -1.55
RNF139-202ENST00000517684 RREB1Q92766 1687 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 DUOX1Q9NRD9 1551 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 DCCP43146 1447 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 CCDC187A0A096LP49 1063 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 RRN3P2A6NIE6 340 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 EIF3CLB5ME19 914 aaKnown RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 TJP3O95049 919 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 TFRCP02786 760 aaKnown RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 ATP1A1P05023 1023 aaKnown RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 TMIGD3P0DMS9 266 aaPredicted RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 CALM1P0DP23 149 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 CALM2P0DP24 149 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 CALM3P0DP25 149 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 CKMT1AP12532 417 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 ITPKBP27987 946 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 CDC25AP30304 524 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 CYLC1P35663 651 aaPredicted RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 EIF5P55010 431 aaKnown RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 KRT83P78385 493 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 TXNL4AP83876 142 aaKnown RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 UBXN1Q04323 297 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 CCDC15Q0P6D6 951 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 STIM1Q13586 685 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 GALNTL6Q49A17 601 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 EARS2Q5JPH6 523 aaKnown RBP5.34□□□□□ -1.55
RNF139-202ENST00000517684 MTHFD1LQ6UB35 978 aa5.34□□□□□ -1.55
RNF139-202ENST00000517684 NAPRTQ6XQN6 538 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms