RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 GULP1Q9UBP9 304 aa11.65□□□□□ -0.54
TRAPPC9-203ENST00000517667 LOXL2Q9Y4K0 774 aa11.65□□□□□ -0.54
TRAPPC9-203ENST00000517667 USP9YO00507 2555 aaPredicted RBP11.65□□□□□ -0.55
TRAPPC9-203ENST00000517667 MYO9AB2RTY4 2548 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 A0A1W2PQC6 194 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 ILVBLA1L0T0 632 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 TRIM49BA6NDI0 452 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 DRGXA6NNA5 263 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 CASC3O15234 703 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 DAB1O75553 588 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 GRAP2O75791 330 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 ENDOD1O94919 500 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 HGFP14210 728 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 DNA2P51530 1060 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 PMS1P54277 932 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 SRSF6Q13247 344 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 SERINC3Q13530 473 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 STIM1Q13586 685 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 PKP1Q13835 747 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 C11orf57Q6ZUT1 292 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 TFAP2DQ7Z6R9 452 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 KYQ8NBH2 561 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 EHBP1Q8NDI1 1231 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 PCDH19Q8TAB3 1148 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 KREMEN1Q96MU8 473 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 GSDMAQ96QA5 445 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 CMKLR1Q99788 373 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 B3GNT4Q9C0J1 378 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 CLPBQ9H078 707 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 TKTL2Q9H0I9 626 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 LRRN3Q9H3W5 708 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 WDCPQ9H6R7 721 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 ATP13A1Q9HD20 1204 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 PIGVQ9NUD9 493 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 ARHGEF38Q9NXL2 777 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 STAP1Q9ULZ2 295 aa11.64□□□□□ -0.55
TRAPPC9-203ENST00000517667 NBPF19A0A087WUL8 3843 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 CHD5Q8TDI0 1954 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 IGLV3-10A0A075B6K4 115 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 PRAMEF33A0A0G2JMD5 474 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 A0A1W2PQM1 296 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 C16orf96A6NNT2 1141 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 TMEM110-MUSTN1A8MSY1 372 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 PSMA7O14818 248 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 PRAMEF10O60809 474 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 F9P00740 461 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 CTSEP14091 401 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 HTR1BP28222 390 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 IGFALSP35858 605 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 EIF4A3P38919 411 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 ABL2P42684 1182 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 CXCR3P49682 368 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 HK3P52790 923 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 GEMIN4P57678 1058 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 CCL7P80098 99 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 PNOCQ13519 176 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZNF805Q5CZA5 627 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 TMEM164Q5U3C3 297 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 OLFML1Q6UWY5 402 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 ENOSF1Q7L5Y1 443 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 SLC26A9Q7LBE3 791 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 VASH2Q86V25 355 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 VPS36Q86VN1 386 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 GKN2Q86XP6 184 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZNF683Q8IZ20 524 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 OR7D4Q8NG98 312 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZNF564Q8TBZ8 553 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 SNX21Q969T3 373 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 ISG20Q96AZ6 181 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 FAM81BQ96LP2 452 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 C1orf74Q96LT6 269 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 FUCA2Q9BTY2 467 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 SPON2Q9BUD6 331 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 OSBPL1AQ9BXW6 950 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 SIRPGQ9P1W8 387 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 HECAQ9UBI9 543 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 TUBD1Q9UJT1 453 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 PNMA8BQ9ULN7 279 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 GPR34Q9UPC5 381 aa11.63□□□□□ -0.55
TRAPPC9-203ENST00000517667 UTP20O75691 2785 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZMPSTE24O75844 475 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 TM7SF2O76062 418 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 SMC2O95347 1197 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 PNLIPP16233 465 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ITIH1P19827 911 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ETFBP38117 255 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 PEX5P50542 639 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ARF5P84085 180 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 SLC6A3Q01959 620 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZFP36L1Q07352 338 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 BORAQ6PGQ7 559 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 FAM183BPQ6ZVS7 135 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZFAND4Q86XD8 727 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 DTX1Q86Y01 620 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZDHHC17Q8IUH5 632 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms