RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 YES1P07947 543 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 POLR2MP0CAP2 368 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 ACRP10323 421 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CDH1P12830 882 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RAB3AP20336 220 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 HLA-FP30511 346 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CIITAP33076 1130 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RFC4P35249 363 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SERPINB5P36952 375 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 YAP1P46937 504 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRAPPC10P48553 1259 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 EIF6P56537 245 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 DEFA1P59665 94 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 DEFA3P59666 94 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RAB4BP61018 213 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 COPZ1P61923 177 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 YWHAGP61981 247 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRAMEP78395 509 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TXNL4AP83876 142 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 MGAT5Q09328 741 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 BFSP1Q12934 665 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 DLG1Q12959 904 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 COL9A2Q14055 689 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAF5Q15542 800 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CYP2A13Q16696 494 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 HSP90AA4PQ58FG1 418 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RSBN1Q5VWQ0 802 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT3A1Q6NUS8 523 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TATDN1Q6P1N9 297 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RFWD3Q6PCD5 774 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 FOXR2Q6PJQ5 311 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 USP51Q70EK9 711 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 FKBP9P1Q75LS8 142 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLFN11Q7Z7L1 901 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RALYLQ86SE5 291 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 GLRX5Q86SX6 157 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 LUZP2Q86TE4 346 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 DPP9Q86TI2 863 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 MTDHQ86UE4 582 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 KIF18BQ86Y91 864 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC44A2Q8IWA5 706 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SRRM1Q8IYB3 904 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCDC105Q8IYK2 499 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RCOR2Q8IZ40 523 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 METTL25Q8N6Q8 603 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCNYL1Q8N7R7 359 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 ANKRD42Q8N9B4 389 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR5T2Q8NGG2 359 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC30A5Q8TAD4 765 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 BLOC1S5Q8TDH9 187 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 GANCQ8TET4 914 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RAB2BQ8WUD1 216 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC44A1Q8WWI5 657 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSPC1Q8WXF1 523 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CELF1Q92879 486 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TBC1D20Q96BZ9 403 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 C12orf43Q96C57 262 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC47A1Q96FL8 570 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TMEM80Q96HE8 168 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM167AQ96KS9 214 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 QKIQ96PU8 341 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 GMLQ99445 158 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 WACQ9BTA9 647 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZSCAN5AQ9BUG6 496 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRAF4Q9BUZ4 470 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 MXD3Q9BW11 206 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CHID1Q9BWS9 393 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TEKT3Q9BXF9 490 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TTYH3Q9C0H2 523 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRDM14Q9GZV8 571 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 USP44Q9H0E7 712 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 FOXP1Q9H334 677 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 RNF41Q9H4P4 317 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 STN1Q9H668 368 aaKnown RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARMC7Q9H6L4 198 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 LRRC19Q9H756 370 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 ERVMER34-1Q9H9K5 563 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CAB39LQ9H9S4 337 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 GPN2Q9H9Y4 310 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 B3GNT2Q9NY97 397 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAB2Q9NYJ8 693 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 IL37Q9NZH6 218 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 NYAP2Q9P242 653 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 HEY2Q9UBP5 337 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 GPR160Q9UJ42 338 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 TLK1Q9UKI8 766 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 MINPP1Q9UNW1 487 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRKAB1Q9Y478 270 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 SNX5Q9Y5X3 404 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAU2Q9Y6X3 613 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 PXDNLA1KZ92 1463 aa4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 CEP170BQ9Y4F5 1589 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P19-201ENST00000517578 IQGAP3Q86VI3 1631 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MYO3AQ8NEV4 1616 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MADDQ8WXG6 1647 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 KIF20BQ96Q89 1820 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCDC163A0A0D9SF12 145 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PCP4L1A6NKN8 68 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF487B1APH4 448 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 C9IYK1 514 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms