RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 ST14Q9Y5Y6 855 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CENPEQ02224 2701 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SPTAN1Q13813 2472 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CHD5Q8TDI0 1954 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 EME2A4GXA9 379 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 F8VZ95 297 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TK2O00142 265 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NTN3O00634 580 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 AP1G1O43747 822 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FUCA1P04066 466 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PRNPP04156 253 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 UGT2B4P06133 528 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CDK4P11802 303 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HGFP14210 728 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 UCHL3P15374 230 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TSHRP16473 764 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 JUNDP17535 347 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 AKT2P31751 481 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 RFC1P35251 1148 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KRT9P35527 623 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NUDT1P36639 197 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ARSDP51689 593 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CLCN6P51797 869 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NEK3P51956 506 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ADKP55263 362 aaKnown RBP8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 JAM2P57087 298 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DAB2P98082 770 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 E2F1Q01094 437 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CFHR1Q03591 330 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 C19orf57Q0VDD7 668 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CLN3Q13286 438 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PDE1CQ14123 709 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 WSCD2Q2TBF2 565 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 MYLK3Q32MK0 819 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LINC00303Q3SY05 128 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SLC45A4Q5BKX6 768 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PLA2G15Q8NCC3 412 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LMX1AQ8TE12 382 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TSACCQ96A04 125 aaPredicted RBP8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KLHL32Q96NJ5 620 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TRIM62Q9BVG3 475 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ZYG11BQ9C0D3 744 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HSD3B7Q9H2F3 369 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ZDHHC6Q9H6R6 413 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 POLR1BQ9H9Y6 1135 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 METTL5Q9NRN9 209 aaKnown RBP8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LHX3Q9UBR4 397 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 OR12D3Q9UGF7 316 aa8.4□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TEX51A0A1B0GUA7 166 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TTC24A2A3L6 582 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 A6NNZ2 444 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 AGRPO00253 132 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MUSKO15146 869 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KLK10O43240 276 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 AQP9O43315 295 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 GP1BAP07359 652 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 UNGP13051 313 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MMP8P22894 467 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ACTN2P35609 894 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SCNN1AP37088 669 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PPP1R2P41236 205 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MTIF2P46199 727 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 OXCT1P55809 520 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RPS21P63220 83 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KRT83P78385 493 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NRG1Q02297 640 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RAPGEF1Q13905 1077 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 IHHQ14623 411 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MAN2A1Q16706 1144 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CA9Q16790 459 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CDO1Q16878 200 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ALG11Q2TAA5 492 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PRRT3Q5FWE3 981 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 C3orf38Q5JPI3 329 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 WDR59Q6PJI9 974 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 VPS36Q86VN1 386 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PARGQ86W56 976 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PCDH20Q8N6Y1 951 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KYQ8NBH2 561 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TMEM35BQ8NCS4 154 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MAPK15Q8TD08 544 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PMEPA1Q969W9 287 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ISG20Q96AZ6 181 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 IFT43Q96FT9 208 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 HMCESQ96FZ2 354 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FEM1CQ96JP0 617 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 EXOC2Q96KP1 924 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZNF578Q96N58 590 aaPredicted RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TUBGCP2Q9BSJ2 902 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 WRAP53Q9BUR4 548 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FOXP3Q9BZS1 431 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CEP44Q9C0F1 390 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TMEM248Q9NWD8 314 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TAB2Q9NYJ8 693 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PPARGC1AQ9UBK2 798 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TPX2Q9ULW0 747 aaKnown RBP8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SIK3Q9Y2K2 1263 aa8.39□□□□□ -1.07
SCARNA20.3-201ENST00000516913 A0A0U1RQS6 177 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms