RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PPM1DO15297 605 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC26A4O43511 780 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 FRS3O43559 492 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PRAMEF2O60811 474 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DKC1O60832 514 aaKnown RBP eCLIP3.25□□□□□ -1.891e-323■■■■■ 85
SCARNA13-201ENST00000516672 GCATO75600 419 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 RNASEH2AO75792 299 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 BMP15O95972 392 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PSAPP07602 524 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 ANXA6P08133 673 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CD48P09326 243 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM86B2P0C5J1 330 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3HP0C7X1 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CSH1P0DML2 217 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CSH2P0DML3 217 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 HAPLN1P10915 354 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 NME1P15531 152 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CD58P19256 250 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 EPHB2P29323 1055 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DGKGP49619 791 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TKTL1P51854 596 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 JAK3P52333 1124 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CASP9P55211 416 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC7A9P82251 487 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DNM1Q05193 864 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 VEZF1Q14119 521 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PDIA5Q14554 519 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PRKD1Q15139 912 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 UBE2SQ16763 222 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 RILPL1Q5EBL4 403 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 KPRPQ5T749 579 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 ATL3Q6DD88 541 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3GQ6DHY5 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 VASNQ6EMK4 673 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3CQ6IPX1 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 B3GNT9Q6UX72 402 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SERPINA13PQ6UXR4 307 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 C3P1Q6ZMU1 363 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 BRAPQ7Z569 592 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SPRED1Q7Z699 444 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PAQR7Q86WK9 346 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DENND1CQ8IV53 801 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CCDC83Q8IWF9 413 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DIS3L2Q8IYB7 885 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3Q8IZP1 549 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 MEIOBQ8N635 442 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 ZNF366Q8N895 744 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 GALNT6Q8NCL4 622 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PPP1R14CQ8TAE6 165 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBCKQ8TEA7 893 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PPP4R1Q8TF05 950 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 AGAP11Q8TF27 550 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CT55Q8WUE5 264 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PRPF31Q8WWY3 499 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PIBF1Q8WXW3 757 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC5A5Q92911 643 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 WBP2Q969T9 261 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 OTUB2Q96DC9 234 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TRMT2BQ96GJ1 504 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 MAGED4Q96JG8 741 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CNDP1Q96KN2 507 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 MYRFLQ96LU7 910 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 NOX5Q96PH1 765 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SIGLEC12Q96PQ1 595 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC2A13Q96QE2 648 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TAAR6Q96RI8 345 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DMRTA2Q96SC8 542 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 NUDT22Q9BRQ3 303 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 ZNF577Q9BSK1 485 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 NDC1Q9BTX1 674 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 GTPBP4Q9BZE4 634 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 GSX2Q9BZM3 304 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PABPC3Q9H361 631 aaKnown RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 KCNF1Q9H3M0 494 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 ZSCAN16Q9H4T2 348 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 ZNF552Q9H707 407 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 VRTNQ9H8Y1 702 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 APMAPQ9HDC9 416 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 UXTQ9UBK9 157 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TCEAL9Q9UHQ7 104 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SMC3Q9UQE7 1217 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DMTF1Q9Y222 760 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DNAJC16Q9Y2G8 782 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PPME1Q9Y570 386 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 NUB1Q9Y5A7 615 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PCDHA10Q9Y5I2 948 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CPQQ9Y646 472 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PKHD1P08F94 4074 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 FREM1Q5H8C1 2179 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 HSPG2P98160 4391 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 A0A1W2PPR1 153 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 CCDC78A2IDD5 438 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 TMEM150BA6NC51 233 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 TCAF2A6NFQ2 919 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 NEDD8-MDP1E9PL57 170 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 GOLGA6L22H0YM25 854 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 H3BQV1 296 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 TGFBR3LH3BV60 316 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 ADAM10O14672 748 aa3.24□□□□□ -1.89
SCARNA13-201ENST00000516672 YY2O15391 372 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms