RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 MIR1-1HGQ9H1L0 117 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDT1Q9H211 546 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CLMPQ9H6B4 373 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 WDCPQ9H6R7 721 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACTR5Q9H9F9 607 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 POLD4Q9HCU8 107 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SRA1Q9HD15 236 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SEMA4BQ9NPR2 832 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 B3GAT2Q9NPZ5 323 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GDF3Q9NR23 364 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RASSF1Q9NS23 344 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 POLR3BQ9NW08 1133 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNHIT6Q9NWK9 470 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM206AQ9NX38 181 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PPP4R2Q9NY27 417 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MAP3K20Q9NYL2 800 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RGL1Q9NZL6 768 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KLRF1Q9NZS2 232 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HSFX1Q9UBD0 423 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MAGEC2Q9UBF1 373 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CTSFQ9UBX1 484 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OPN4Q9UHM6 478 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRSS50Q9UI38 385 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HOOK1Q9UJC3 728 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TSKSQ9UJT2 592 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LEF1Q9UJU2 399 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 JPT1Q9UK76 154 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDH9Q9ULB4 789 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OAZ3Q9UMX2 235 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCDHA4Q9UN74 947 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 STUB1Q9UNE7 303 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NOD1Q9Y239 953 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HS3ST2Q9Y278 367 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CNPY2Q9Y2B0 182 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF711Q9Y462 761 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RBM19Q9Y4C8 960 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DAGLAQ9Y4D2 1042 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCDHB1Q9Y5F3 818 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCDHGB5Q9Y5G0 923 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCDHA10Q9Y5I2 948 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCNMB2Q9Y691 235 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PARP3Q9Y6F1 533 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC4A7Q9Y6M7 1214 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 S4R3F8 94 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FPGT-TNNI3KV9GXZ4 949 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 EML6Q6ZMW3 1958 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PAPPA2Q9BXP8 1791 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADGRF5Q8IZF2 1346 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MAPK8IP3Q9UPT6 1336 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SYNJ1O43426 1573 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 YEATS2Q9ULM3 1422 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SCN9AQ15858 1988 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 THADAQ6YHU6 1953 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADGRB3O60242 1522 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TRGV2A0A075B6R0 118 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LOC110117498A0A087WWA1 95 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 A0A087WWV3 80 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 A0A0G2JMM0 328 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGLV5-39A0A0G2JS06 123 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 A0A1B0GTH6 734 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 A0A1B0GUH1 482 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 A0A1W2PPB8 328 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LOC105371045A0A1W2PR82 267 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 A0A1W2PRS3 328 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MYBPHLA2RUH7 354 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MBLAC1A4D2B0 266 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CFAP69A5D8W1 941 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RGSL1A5PLK6 1076 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C2orf78A6NCI8 922 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM231BA6NCW3 169 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RRN3P2A6NIE6 340 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACOD1A6NK06 481 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ASB14A6NK59 587 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PMS2P5A8MQ11 134 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 METTL12A8MUP2 240 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KIR3DP1A8MWS1 328 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRAC2D3DTV9 90 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 E7ENQ6 273 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LOC110117498-PIK3R3F6TDL0 507 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LINC01387J3KSC0 135 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MYO1CO00159 1063 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 STXBP3O00186 592 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TULP2O00295 520 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CCL21O00585 134 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SH2B2O14492 632 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCNK3O14649 394 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FANCGO15287 622 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FOXP2O15409 715 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PJA2O43164 708 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF749O43361 778 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TGM5O43548 720 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SGCEO43556 437 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACTN4O43707 911 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FGF17O60258 216 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CEP104O60308 925 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZEB2O60315 1214 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 YPEL1O60688 119 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CCDC22O60826 627 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RNGTTO60942 597 aaKnown RBP-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms