RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PIGHQ14442 188 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 LRRC23Q53EV4 343 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 INO80DQ53TQ3 878 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 NANOGP8Q6NSW7 305 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 C1orf228Q6PIY5 440 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 HACD2Q6Y1H2 254 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 TMEM184AQ6ZMB5 413 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 GABPB2Q8TAK5 448 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 TFAP2BQ92481 460 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 FAM111AQ96PZ2 611 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 GAD1Q99259 594 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ENAMQ9NRM1 1142 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 NCKIPSDQ9NZQ3 722 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 INPP5FQ9Y2H2 1132 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 YBX2Q9Y2T7 364 aaKnown RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 PCDHGA7Q9Y5G6 932 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 H3BRJ5 948 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 PIRO00625 290 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 PTGESO14684 152 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CA3P07451 260 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 BMP2P12643 396 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CD58P19256 250 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CNTFP26441 200 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 MLH1P40692 756 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CETN2P41208 172 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ELK3P41970 407 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ALDH1A3P47895 512 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 NDST2P52849 883 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 PDE1CQ14123 709 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 TPGS2Q68CL5 300 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 DCDC5Q6ZRR9 648 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 SPRED1Q7Z699 444 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 PPM1NQ8N819 430 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ZNF420Q8TAQ5 688 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 KIF12Q96FN5 646 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CYTH2Q99418 400 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 FAM118BQ9BPY3 351 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CCDC77Q9BR77 488 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 WWP1Q9H0M0 922 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ZBP1Q9H171 429 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 DCAF16Q9NXF7 216 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 BARX2Q9UMQ3 279 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 LACTBL1A8MY62 500 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 SLC22A1O15245 554 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 MAGEB3O15480 346 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 SPOPO43791 374 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 TRMUO75648 421 aaKnown RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 FGF18O76093 207 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 FGF19O95750 216 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 TRUB2O95900 331 aaKnown RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 UGT2B4P06133 528 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 LINC00271P0C7V0 271 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ZNF24P17028 368 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 MYF6P23409 242 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 EPHA3P29320 983 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 HOXA9P31269 272 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 GLUD2P49448 558 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 SCNN1GP51170 649 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 TMED1Q13445 227 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 LRP8Q14114 963 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 UPP1Q16831 310 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 MGAT5BQ3V5L5 792 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 TSTD2Q5T7W7 516 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 FYB2Q5VWT5 728 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 KCTD11Q693B1 232 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 FAM117BQ6P1L5 589 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ZBTB33Q86T24 672 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CROCCP3Q8IVE0 287 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 PIWIL2Q8TC59 973 aaKnown RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 CASP10Q92851 521 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 HAUS1Q96CS2 278 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 DNAJC1Q96KC8 554 aaKnown RBP7.51□□□□□ -1.21
CLIP1-205ENST00000514271 DPP3Q9NY33 737 aa7.51□□□□□ -1.21
CLIP1-205ENST00000514271 SCN1AP35498 2009 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 TTC24A2A3L6 582 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-205ENST00000514271 FUCA1P04066 466 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 HOXB8P17481 243 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-205ENST00000514271 FGFR3P22607 806 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 LHX1P48742 406 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 NR1H2P55055 460 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 RELAQ04206 551 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 DPYSQ14117 519 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 AAK1Q2M2I8 961 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 XAF1Q6GPH4 301 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 LAIR2Q6ISS4 152 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 UNC5BQ8IZJ1 945 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 ST13P4Q8IZP2 240 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-205ENST00000514271 THEM5Q8N1Q8 247 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 ARL10Q8N8L6 244 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 GOLM1Q8NBJ4 401 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 LEMD2Q8NC56 503 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 GRIN3AQ8TCU5 1115 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 DTX3LQ8TDB6 740 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 PYROXD1Q8WU10 500 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 GIMAP1Q8WWP7 306 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 CGREF1Q99674 301 aa7.5□□□□□ -1.21
CLIP1-205ENST00000514271 CORO1BQ9BR76 489 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms