RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 PTPN9P43378 593 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 PTP4A2Q12974 167 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 ATXN7L2Q5T6C5 722 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 TTC7BQ86TV6 843 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 PARGQ86W56 976 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 CCDC185Q8N715 623 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 IFI44Q8TCB0 444 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 LMX1AQ8TE12 382 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 ASB12Q8WXK4 309 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 CENPIQ92674 756 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 TBC1D31Q96DN5 1066 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 PCDHB18PQ96TA0 734 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 USP29Q9HBJ7 922 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 FAM207AQ9NSI2 230 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 CHD5Q8TDI0 1954 aa13.59□□□□□ -0.23
POLR2J3-217ENST00000513438 AQP9O43315 295 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 BUB1O43683 1085 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 RAMP2O60895 175 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 CSO75390 466 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 UNGP13051 313 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 HDAC4P56524 1084 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 JAM2P57087 298 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 PFN3P60673 137 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 EIF2B5Q13144 721 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 KRT31Q15323 416 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 CDKN3Q16667 212 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 DEFB133Q30KQ1 61 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 ZCCHC8Q6NZY4 707 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 WDR59Q6PJI9 974 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 GPR155Q7Z3F1 870 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 ZNF354CQ86Y25 554 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 SPACA3Q8IXA5 215 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 LSMEM2Q8N112 164 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 NETO2Q8NC67 525 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 DENND6BQ8NEG7 585 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 ENOX1Q8TC92 643 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 MAPK15Q8TD08 544 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 FAM172AQ8WUF8 416 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 CENPTQ96BT3 561 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 LGMNQ99538 433 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 ADAM22Q9P0K1 906 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 SALL4Q9UJQ4 1053 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 NEU3Q9UQ49 428 aa13.58□□□□□ -0.24
POLR2J3-217ENST00000513438 KALRNO60229 2985 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 AREL1O15033 823 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 EPHB6O15197 1021 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 MMP20O60882 483 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 C1QL1O75973 258 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 ITIH2P19823 946 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 TGM2P21980 687 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 STAT1P42224 750 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 LSSP48449 732 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 CXADRP78310 365 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 GABREP78334 506 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 TLE3Q04726 772 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 C1orf61Q13536 156 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 SCYL2Q6P3W7 929 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 GUSBP11Q6P575 273 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 EFL1Q7Z2Z2 1120 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 SLFN11Q7Z7L1 901 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 PYROXD2Q8N2H3 581 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 LSM14AQ8ND56 463 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 ZNF248Q8NDW4 579 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 BTN2A2Q8WVV5 523 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 NTAN1Q96AB6 310 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 ARHGEF26Q96DR7 871 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 ZNF578Q96N58 590 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 IL12RB2Q99665 862 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 OSBPL1AQ9BXW6 950 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 TTYH3Q9C0H2 523 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 KLC2Q9H0B6 622 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 TCEAL2Q9H3H9 227 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 NOL6Q9H6R4 1146 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 POLR1BQ9H9Y6 1135 aa13.57□□□□□ -0.24
POLR2J3-217ENST00000513438 TEX51A0A1B0GUA7 166 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 EME2A4GXA9 379 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 ZSCAN5CA6NGD5 496 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 SIGLEC16A6NMB1 481 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 TPP1O14773 563 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 GCATO75600 419 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 TM7SF2O76062 418 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 TMCC1O94876 653 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 TPM2P07951 284 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 TIMP2P16035 220 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 GPD1P21695 349 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 THOP1P52888 689 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 ADKP55263 362 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms