RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ITGAMP11215 1152 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 HLA-EP13747 358 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 GJA1P17302 382 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 BCKDHBP21953 392 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PAX3P23760 479 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 MARCKSP29966 332 aaPredicted RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CDC25CP30307 473 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 YWHABP31946 246 aaKnown RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CASRP41180 1078 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PTGER3P43115 390 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TUFMP49411 452 aaKnown RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 RCAN1P53805 252 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ARPP19P56211 112 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 RHDQ02161 417 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF33AQ06730 810 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 RESTQ13127 1097 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 HDAC1Q13547 482 aaPredicted RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF268Q14587 947 aaPredicted RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 EMC2Q15006 297 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 SMAD1Q15797 465 aaKnown RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PFKFB3Q16875 520 aaPredicted RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CTXN3Q4LDR2 81 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 XKR9Q5GH70 373 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 XKR4Q5GH76 650 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 GPR158Q5T848 1215 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 METRNLQ641Q3 311 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CENPPQ6IPU0 288 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF280DQ6N043 979 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ALKAL1Q6UXT8 129 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF788Q6ZQV5 615 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TMPRSS12Q86WS5 348 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TMC8Q8IU68 726 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 NAXDQ8IW45 347 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CMTM8Q8IZV2 173 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CPA6Q8N4T0 437 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 KIAA1958Q8N8K9 716 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PIK3C3Q8NEB9 887 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 FAM20AQ96MK3 541 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TUBGCP5Q96RT8 1024 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ADPGKQ9BRR6 497 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TPSD1Q9BZJ3 242 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 EBF3Q9H4W6 596 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 HPS4Q9NQG7 708 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TDP1Q9NUW8 608 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 MMP17Q9ULZ9 603 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 NFE2L3Q9Y4A8 694 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PCDHGB2Q9Y5G2 931 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 MYO9AB2RTY4 2548 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TRIP11Q15643 1979 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PCDH15Q96QU1 1955 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PTPRQQ9UMZ3 2332 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 UBR5O95071 2799 aaPredicted RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF638Q14966 1978 aaKnown RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 SMIM28A0A1B0GU29 152 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 WDR91A4D1P6 747 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ENO4A6NNW6 628 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 B5MCH6 92 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 DVL2O14641 736 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 MGST3O14880 152 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 TBX3O15119 743 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 PRPF3O43395 683 aaKnown RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 EDIL3O43854 480 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 BRINP1O60477 761 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF217O75362 1048 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 LYPLA2O95372 231 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 CELA2AP08217 269 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 GNSP15586 552 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 RXRAP19793 462 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ITPKBP27987 946 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 GABRR2P28476 465 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 AVPR1AP37288 418 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 BRCC3P46736 316 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 KIF11P52732 1056 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 UCNP55089 124 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 PROK1P58294 105 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 SMARCB1Q12824 385 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 PPP2R5CQ13362 524 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 MYBPC2Q14324 1141 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF174Q15697 407 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 DCAF4L1Q3SXM0 396 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 PREPLQ4J6C6 727 aaPredicted RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 TAF1BQ53T94 588 aaPredicted RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 WDR45BQ5MNZ6 344 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 EOGTQ5NDL2 527 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 SYCP2LQ5T4T6 812 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 C20orf194Q5TEA3 1177 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 PLA2G4FQ68DD2 849 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 PPP4R3AQ6IN85 833 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ANO7Q6IWH7 933 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 IL27RAQ6UWB1 636 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 PASD1Q8IV76 773 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ENGASEQ8NFI3 743 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 CCDC148Q8NFR7 591 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 OR10H5Q8NGA6 315 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 OSCP1Q8WVF1 389 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 FGF11Q92914 225 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 NXPE2Q96DL1 559 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF419Q96HQ0 510 aaPredicted RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 HIST1H2AHQ96KK5 128 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 HIST1H2AJQ99878 128 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms